Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4995 |
Symbol | |
ID | 5196081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | + |
Start bp | 109520 |
End bp | 110656 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640579430 |
Product | metallophosphoesterase |
Protein accession | YP_001260378 |
Protein GI | 148550948 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 71 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCCCT CTCGGCTAAA GCGGGGCATG CGCTTGATCC ACACCGCCGA TTGGCAGCTC GGCAAACCCT TCGGCCGCTT TGAACCTGAC GTTCGTGCTG CCCTAACCGA TGCGCGGTTC GAGGCCATCG ACGCGATCGG TAAGGCTGCC GCTGAGAACG TCGCAGGCCA TGTGCTCGTT GCAGGCGATG TGTTTGACAC AGAGGGCCCG GAAGACCGTA CGATCGTGCA GGCCGTCTCC CGAATGGCTC GCCATGGCTG CCGCTGGTGG CTGCTCCCCG GCAATCATGA TTATGCCAGA AACGGTGGCC TATGGGACCG CGTGATCGGA AAAGCTGCGC CGAATATCAC CGTGCTGCGT CATCCCACGC CAGTGGAGAT CGAAAGCGGC ACATGGATCT TGCCCGCCCC TCTCACCCAT CGGCATAACC TGGACGATCC CACTAGCGCC TTTGACGCTA TGGAGACGCC GGGTGCGAAC CTTAAGATCG GTCTCGCGCA TGGGTCTATC CGAGACTTCG GCTCTCGCGG GGAAGCGAAC AATCAGATCG CGCCTGACAG GGCCAGGCTT TCCGGCCTCG ACTATCTTGC GCTGGGCGAT TGGCACGGGA CTCTCGAGGT AGACAGTCGC ACCTGGTACG CAGGCACACC AGAGACGGAT CGCTTCCAGC GCGATGCGCC GGGTCAAATC TTGCTGGTCG ACATCGAAAC GGGACATCTT CCAACCGTGA CGCCGCTGCG GACTGGACGG TTCCAATGGC TGAAGCGCGA CTGGCGGGTC AACGACTTCG CAGCCTTTGA AGCCGAACGG CAAACGCTGT GGAACGAGAT CGAGCCGTCG GCGACATTGC TGCAGCTTGC TATTGCCGGC GTCACCAGTC TTTCCGAACG GATCAGGGTC CTCGAAATCC TCGAGGCGGA TGTCGGCCAC CAGCTACGAT ACCTCGAAGC TCGTACCGAC GACCTTGTCG CCCAGCCCAG TGAGGAAGAC ATGCAGGTCT TGGCAGTGGA AGGCGTGCTC GGTTCGGCCG CGCAGAAACT CAATGCGTTA CGAGAAAGTG GGAGCGTAGA CGGCGTCATC GCGCGGCGTG CCCTCGAGCG CCTGTTTGTC GAGTTTGCTC GGGGAGAGGC CGCATGA
|
Protein sequence | MPPSRLKRGM RLIHTADWQL GKPFGRFEPD VRAALTDARF EAIDAIGKAA AENVAGHVLV AGDVFDTEGP EDRTIVQAVS RMARHGCRWW LLPGNHDYAR NGGLWDRVIG KAAPNITVLR HPTPVEIESG TWILPAPLTH RHNLDDPTSA FDAMETPGAN LKIGLAHGSI RDFGSRGEAN NQIAPDRARL SGLDYLALGD WHGTLEVDSR TWYAGTPETD RFQRDAPGQI LLVDIETGHL PTVTPLRTGR FQWLKRDWRV NDFAAFEAER QTLWNEIEPS ATLLQLAIAG VTSLSERIRV LEILEADVGH QLRYLEARTD DLVAQPSEED MQVLAVEGVL GSAAQKLNAL RESGSVDGVI ARRALERLFV EFARGEAA
|
| |