| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4988 |
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| Symbol | |
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| ID | 5195906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | + |
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| Start bp | 100861 |
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| End bp | 101979 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640579423 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001260371 |
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| Protein GI | 148550941 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGAGG ACCTTCGACG CAGCTATCCT GAGGCCAAGT TCATCGTGAC GGCCACCCCC
GGCAATCATG CCGCCCAAAT CGTCCGGGAC CTCCTCGCGG GGCTCAAAAG CGCGGACGTG
ATCGTGCTTG ATACCGGGGA CATCAACGCC TGGAGGGTTC TCTGCGAGCA CCTCAGATGC
GTCCCACCAA TATGCCCTTT CCCGACGCTA GAGGACCTTG GGCAGCGGCC TGTCATGGAA
ACATCCAGGC AACCCATTCA GTACCGGAAA CGCGCAGCTT CCAAGTGGGA TCGGTCTCCA
TGGATCGTCG AGCTAGATCA TGGCGCATGG ACGGGCATTC GAACTTCCCC GCGACCTCCC
GAGGGGGATG GCAATTGGAG CGATGCCGAC GACGGCGCTC GGAACCTCGA TCTCAAGCAT
TGGGCTGCGC GGTCGGACAC GTTCACTAGC AACCTAGCCT TGTTCCGCCC TTCAAATGTC
GAACACGACG GGCTCAACGG AGCGAAGATA CATGTTCGAC GCGAAGATCT TGGCGTCCGC
CAATATAGTG CGGGCGCTCT GACCAGCCAT GCTGACTTTC TCTTTGGACG GTTCGAGGCG
ACCTTCAGAG CCTCTGACGT GCCAGGGGTG ATTACGGGCT TCTTCCTTCA CCGCAACTCA
CCGCATCAAG AAATCGACAT CGAGATACTT GGGCGTAAAC CAGACCGGCT GCTGGTCAAT
GTCTTCTACA ACCCGGGCAG CCAGGGTGAC AAATTCGACT ACGGCTACAG AGGTTGTCCG
AGCTACATCG ATCTGGGCTT CGATGCCTCG AAGGGGATGC ATCGATATGC AATCGAGTGG
ACCCCTTGCG AGATCCGATG GCTTGTGGAC GACCTGCTGG TCCATCGGCG TGATCTTTGG
GATCCAACCC CGATCCCGCA TCTGCCGATG AAGCTGCATT TCAACGCCTG GCCCTCTCGC
GCCTCCCAGT TCGCAGGGCG CCTCAGCAAC CGCGGACTGC CAGCGATGGC TGAGGTGCAG
ACGGTGCGGG CGTCCGCGTT CGATCCATCG TTAATTGAAC GAACAGCTCG AGGCTTCTCG
GGCACCGACG AACCAGCCAA AGGTGGAGCT TTAACTTGA
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| Protein sequence | MVEDLRRSYP EAKFIVTATP GNHAAQIVRD LLAGLKSADV IVLDTGDINA WRVLCEHLRC
VPPICPFPTL EDLGQRPVME TSRQPIQYRK RAASKWDRSP WIVELDHGAW TGIRTSPRPP
EGDGNWSDAD DGARNLDLKH WAARSDTFTS NLALFRPSNV EHDGLNGAKI HVRREDLGVR
QYSAGALTSH ADFLFGRFEA TFRASDVPGV ITGFFLHRNS PHQEIDIEIL GRKPDRLLVN
VFYNPGSQGD KFDYGYRGCP SYIDLGFDAS KGMHRYAIEW TPCEIRWLVD DLLVHRRDLW
DPTPIPHLPM KLHFNAWPSR ASQFAGRLSN RGLPAMAEVQ TVRASAFDPS LIERTARGFS
GTDEPAKGGA LT
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