Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4979 |
Symbol | |
ID | 5196067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | - |
Start bp | 88602 |
End bp | 89906 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640579415 |
Product | hypothetical protein |
Protein accession | YP_001260363 |
Protein GI | 148550933 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 0.941662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAAC TTCCGACCAT CAAGCCCCGT GAGCGCGACA CGATCGTCCA GGCACTTGCT GCGGGCGTGG TTCCCCGTAT TGGGCTTCAG CACATCCAGG TTGGGCGCTC GCGCGAAGTA GGAGCGCTGG TCAAGGACAT CGACCGGATT GTGGAAGGCG GCTCATCCTG CCGCTTCATC ATCGGCGAAT ATGGCGCGGG CAAGACATTC TTCCTGAGCC TCATTCGCTT GATTGCGCTG GAACGTCGCT GCGTCACCAT CCATGCTGAC CTCGCACCCG ATCGCCGTGT CCATGCTACA GGCGGGCAGG CGAGAGGCCT TTATGCCGAG GCTGTTCGCA ACATGGCGAC CCGAACCAAG GCGGATGGCG GTGCATTGCC GAGCGTCGTC GAGCGTTTCA TCAGTGAATG CGTCAAGCAG GCGCATGCCG AGAGCCTTCC TGTGGAAGGC GTCATCGATA AGCGGCTCTC GATGATCCAG GAACTCGTTG GCGGCCATGA CTTTGCTCAC GTCCTTAAAG CCTATTGGCG GGGAAGCGAG GAGGGGAATG AACCTCTCAA GGCCGCTTCC CTGCGTTGGC TGCGGGCGGA ATATACGACG AAGACGGAAG CTCGCCAGGC GCTCGGCGTC CGCTCAATCA TCGATGATGC GGACGTTTAT GACAGCTTGA AGCTTCTGGC GATTTTCGTG CGCCTTGCGG GCTATACCGG GCTCGTCGTC GTGTTCGATG AGATGGTGAA CATCTACAAG CTTCAGAGCG CCCAGGCCCG CAATCAGAAT TTCGAGCAGA TCCTGCGAAT GGTCAATGAC ATGCTGCAGG GCAATAGCGA AGGGCTTGGC TTCATCTTCG GTGGCACGCC CGAATTTCTG ATGGACAGCC GGCGGGGGCT ATACAGCTAC GAGGCTTTGC AATCGCGCCT CGCTGAGAAC CAGTTCGCGG CTCAGGGCCT AGTCGATATG TCCGGACCGG TCATCCGGTT GCAGAACCTC TCGCCTGAGG ATTTCTTGAT CCTGCTGGGC AACATCCGCG CCGTTTTTGC GCTTCGCGAT TCCGAGCGCT ACCTTGTCCC AGACGAAGCG CTGAAAGCAT TCATGGACCA TTGCAGTCGC AGGATTGGGG AAGCCTATTT CCGCACGCCC CGCAACACTA TCAAGGCGTT CGTCCAGTTC CTCGCCATCC TCGAGCAAAA TCCATCGCTC GACTGGCGAG ACCTGATTGG TGGCCTTTCC CTTGATGATG ATCTGAATGA GGAAGACATG GACCAGGCCG ACGGTGATGA CGAACTCTCC GCCTTCTCCC TCTGA
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Protein sequence | MTQLPTIKPR ERDTIVQALA AGVVPRIGLQ HIQVGRSREV GALVKDIDRI VEGGSSCRFI IGEYGAGKTF FLSLIRLIAL ERRCVTIHAD LAPDRRVHAT GGQARGLYAE AVRNMATRTK ADGGALPSVV ERFISECVKQ AHAESLPVEG VIDKRLSMIQ ELVGGHDFAH VLKAYWRGSE EGNEPLKAAS LRWLRAEYTT KTEARQALGV RSIIDDADVY DSLKLLAIFV RLAGYTGLVV VFDEMVNIYK LQSAQARNQN FEQILRMVND MLQGNSEGLG FIFGGTPEFL MDSRRGLYSY EALQSRLAEN QFAAQGLVDM SGPVIRLQNL SPEDFLILLG NIRAVFALRD SERYLVPDEA LKAFMDHCSR RIGEAYFRTP RNTIKAFVQF LAILEQNPSL DWRDLIGGLS LDDDLNEEDM DQADGDDELS AFSL
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