Gene Swit_4966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4966 
Symbol 
ID5196064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp74919 
End bp75332 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content62% 
IMG OID640579402 
Productsingle-strand binding protein 
Protein accessionYP_001260350 
Protein GI148550920 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.875066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACC TCGTCATCCT TGCCGGTAAT GTCGGCGCCA CGCCGGAAGC CCGCACCACC 
CAGGGCGGCA CCAAGATCAC CCACTTCAGC CTCGCGACTT CGCGGCCCAA GCGAGACAGC
AACGGCAAGG TCGTCAAGGA CGACAATGGC CGCCGGATCG AAGATACCGA ATGGCACCGG
ATCACCTGCT TCAACGGCGT CGGCAAGACC GTCGAGCAAT ATGTCGACAA GGGGATGAAG
GTGATGGTGC GCGGTCGCAT CCACTACACC CGCTGGACCG ACAACGAGAA TATCGAGCGG
TACGGCGTCG AGATCATCGC CGACGAGGTG ACCTTCCTCA CCCGCGTCAG GCCCGCCAGT
GGCGACCAAG GCGGCAATGA CAGCTCGGTG GATGACGACG AAATTCCCTT CTGA
 
Protein sequence
MQNLVILAGN VGATPEARTT QGGTKITHFS LATSRPKRDS NGKVVKDDNG RRIEDTEWHR 
ITCFNGVGKT VEQYVDKGMK VMVRGRIHYT RWTDNENIER YGVEIIADEV TFLTRVRPAS
GDQGGNDSSV DDDEIPF