Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4910 |
Symbol | |
ID | 5196036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | - |
Start bp | 22865 |
End bp | 23275 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640579350 |
Product | dehydrogenase |
Protein accession | YP_001260298 |
Protein GI | 148550868 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 84 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.271824 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGCA ATGTGCAAGG ACCATTTGCA ACGATCAGAG CTTTTGTGCC CATGCTGAGA GCGAGCGGCG ACGGCGTAAT TGTCAATATC TCTTCCATTT CCGGATTTAC CGGTCGCGGC AGCAATATTG GTTATTGCGC GTCGAAGGGT GCGCTAGATA CCATGACCAT GTCATTGGCA TCAGCGCTTG GTCCCGAGAT ACGTGTGCTC GCGGTATCGC CTGGAGCGGT TGCGACCGAC TTCGTCGCCG GGCGCGACAG GGCAGCTCTG GAAAAACTAG CCGAGATGAC ACCGCTCAAG CGCGTGATCG AGCCGGAGGA CGTGGCGCGA ACTGTATTGG CTTGTGTGAC ACATCTCAGA GCGACAACCG GAACTAGAAT CATATGTGAC GGTGGAAGAT TCCTAGTCTG A
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Protein sequence | MASNVQGPFA TIRAFVPMLR ASGDGVIVNI SSISGFTGRG SNIGYCASKG ALDTMTMSLA SALGPEIRVL AVSPGAVATD FVAGRDRAAL EKLAEMTPLK RVIEPEDVAR TVLACVTHLR ATTGTRIICD GGRFLV
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