| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4893 |
|---|
| Symbol | |
|---|
| ID | 5195968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009508 |
|---|
| Strand | - |
|---|
| Start bp | 6517 |
|---|
| End bp | 6837 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640579334 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_001260282 |
|---|
| Protein GI | 148550852 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0633] Ferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 0.042497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.0721521 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAAAG TAATTTATGT ATCTGAAGAC GGAAGTGAAT TGGAAACGAC CGTCGATGTC
GGCGTCGATT TGATGCACGC AGGTCTTTAT AATAGCATTC CTGGAATTCT AGGTGAATGC
AGCGGCGGTC TAGCCTGTGC TACTTGCAGG GTTCGTGTGC CTGTTGAATG GCAATCTATA
TTGCCTCCTG CATTCCCCTC TGAAGCAGAA CTTCTTGGTT TCTGCGACGA GGCGCCACCG
GAGGCGCGGC TTTCATGCCA AATCAAAATG ACCCAAGAGC TTGATGGCAT CAGGCTCTTG
GTGTCCAACA ATCTTGATTG A
|
|---|
| Protein sequence | MPKVIYVSED GSELETTVDV GVDLMHAGLY NSIPGILGEC SGGLACATCR VRVPVEWQSI
LPPAFPSEAE LLGFCDEAPP EARLSCQIKM TQELDGIRLL VSNNLD
|
|---|
| |