| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5390 |
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| Symbol | |
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| ID | 5195862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | - |
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| Start bp | 298337 |
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| End bp | 298756 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640579317 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001260265 |
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| Protein GI | 148550826 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCACCG CGATTCCCCA CGCTTTCGAG ATCGGCATCG ATCCCTCCGA CATCGACTTC
ATGGGTCATG TCAACAATGC CAGCTACCTC AAATGGGTAC AGGATGCCGT ACTCGATCAC
TGGCGCTCGC TCGCACCCAG GGAGGCCGTC GCGGCCCATC TCTGGGTCGC GCTCAAGCAT
GAGATCACCT ATCGGCGTCC GACCTTTCTC GACGACCGCG TCATCGCCAC GGTCCTGCTG
GAAAAGGTTC AGGGCGCCCG CGCCTTCTAC GATACGGTGA TCCGTCGAGG CGAAGAGGTG
CTCGCCGAAG TGAAGTCGAG CTGGTGCTGC ATCGATGCGG CCACCCTGCG TCCCGCCCGC
CTGGCGCGGG AGGTGATCCA GCACTTTTTC ACCGCCGATC CCCCTGGCGC TTCAGCTTGA
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| Protein sequence | MTTAIPHAFE IGIDPSDIDF MGHVNNASYL KWVQDAVLDH WRSLAPREAV AAHLWVALKH
EITYRRPTFL DDRVIATVLL EKVQGARAFY DTVIRRGEEV LAEVKSSWCC IDAATLRPAR
LAREVIQHFF TADPPGASA
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