| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5382 |
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| Symbol | |
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| ID | 5195598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | + |
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| Start bp | 287537 |
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| End bp | 289000 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640579309 |
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| Product | TraH family protein |
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| Protein accession | YP_001260257 |
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| Protein GI | 148550818 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.310478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.517796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCA AGAGTTCCGG ACGGGCACGG GCGGCGATCC GGCGCCTCGC TCATGGCGCC
GCCATATTGG CGGCATCGCA TTTCGCGCTG GTGGGCGTTG CCCATGCCGA TGTCGCGGGC
CAGATGAACA GCTTCTTCAA CGACGCGGGC GGTGCGGCCA ATGTGACGGG CCCAAGCGCC
TTCCAGGGCC AGTCGGCCGG CTACTATTCG ATGGGCAACG TCTGGACGCG CTTCCCGCAG
AAATCGGTGT CGCCGTTCAA CCTGCAGTTG CCCAGTGCCC GGGCGGGCTG CGGCGGCATC
GACCTCTTTT CCGGGTCCTT CTCCTTCATC AATGCCTCCG AGATCGTGGC GATGCTCAAG
GCCACCGCCA ACAACGCACT TGGCTTTGCC TTCAAGCTCG CGATTGATTC CGTATCTCCG
GAAATCGGCA AGGTGATGGA CGAGTTCAGC CAGAAGGCGC AGCTCCTCAA CCAGATGAAC
ATCTCGAGCT GCGAGACCGC GCAGGCGCTG GTTGGCGGCA TCTGGCCGCA GATGGACACC
ACCCGCTCGA CCATCTGCGA AGCCATCGGC AACAGCCAGG GCATATTCTC GGACTGGGCC
GCCTCACGGC AGGGCTGCAA CAACGGCAAC CAGCGCGATA ACACGATCGC CGGAAACAGC
GATGCGTCGA TGAAGGACCA GCTTGTCGGC GAGCCGCATA ACTATACCTG GGAGGCCTTG
AAGAAGGCAG GCAAGTTCGG CGCGTTCGAC CAGAGCTTCT CCGAATTCAT CATGACCCTG
GTCGGCACGG TAATCACGAA GCCGTCGGAC GATCCGAGTG TCGGCGGCAA GGTCGTGATG
ATCGGCCCGG CCGAAGACGC CGTGGTAACC GCGCTTCTGG ATGGTACGGC CGATGCGCCG
CCGGTGAAGC TCCTCAAATG CAACGACGAG AACTGCTACG AGGTCGGCGA GCAGACGCTG
TCGGTGCCAG CATCGTCCGC GTTACGCCCG CGGATCGAAG CGCTGATCCA GTCGATGAAC
GACAAGATCC GCAGCGATAC GCCACTCGAT GCCGCGGAAA AGCAGCTTCT GAACATCGCG
ACGGTGCCGA TTTTCAAGAT CCTGAGCGTC CAGGCTTATG CGCATTACTC GCTGTCGCCC
GGCGAGATCC AGGCAATGTC AGAGATCGTC GCGGTCGACC TGTTGACCGC TATGCTCGAC
AATATGATGG ACCGGGTCGA GCAAAGCCAG GTTCATTACC AGACCTTCGA CCAGGCTACC
GCGGCCCAGT GGAAGGCGCA GATCGCCGCT GCCCGCGCTA AATACGCGCA GCGCGACGTC
AAGCTCAACA ACAAGCTGCA GGTCACGATG CAGCTCATCA ACCGCAGCAT GATGCTCGAG
TCCACCCTGC AGAATTCGAT GACGCCGGGC ATGGCTTCGG CGCTGACCTT CTCGCGCGGG
CTGAGCTCGC AGGGGCTGAA CTGA
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| Protein sequence | MARKSSGRAR AAIRRLAHGA AILAASHFAL VGVAHADVAG QMNSFFNDAG GAANVTGPSA
FQGQSAGYYS MGNVWTRFPQ KSVSPFNLQL PSARAGCGGI DLFSGSFSFI NASEIVAMLK
ATANNALGFA FKLAIDSVSP EIGKVMDEFS QKAQLLNQMN ISSCETAQAL VGGIWPQMDT
TRSTICEAIG NSQGIFSDWA ASRQGCNNGN QRDNTIAGNS DASMKDQLVG EPHNYTWEAL
KKAGKFGAFD QSFSEFIMTL VGTVITKPSD DPSVGGKVVM IGPAEDAVVT ALLDGTADAP
PVKLLKCNDE NCYEVGEQTL SVPASSALRP RIEALIQSMN DKIRSDTPLD AAEKQLLNIA
TVPIFKILSV QAYAHYSLSP GEIQAMSEIV AVDLLTAMLD NMMDRVEQSQ VHYQTFDQAT
AAQWKAQIAA ARAKYAQRDV KLNNKLQVTM QLINRSMMLE STLQNSMTPG MASALTFSRG
LSSQGLN
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