| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5381 |
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| Symbol | |
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| ID | 5195612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | + |
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| Start bp | 286722 |
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| End bp | 287537 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640579308 |
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| Product | TraF-like protein |
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| Protein accession | YP_001260256 |
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| Protein GI | 148550817 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02740] TraF-like protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.342632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAGT TCACTAGGAT TTGCGCAGTG GTTCTGGCGC TGATGCCCAT GGCTGTTGAC
GCGCAGGAGG CAGGGGCAGG CCGCGACACG ATCGACGGGC AATCGCCCGA CGACTTCTAT
TGTGGCGAGC GCCGCCTGGG GCAATGGTTC TATTGCTCGA AACCCAAGCC GCGCGAGACC
CGCCCAGCGT CGCCGCAGGC GCCCGAGCCC TCGGCTGCCG AACGCATGGC CGCGATTGCG
AAGGAGCTCG ATGAGCTCAA GGCCCGCGCG ATCCTTGACC CCTCCGAAGA GAATGTCATC
GCCTATGTGC GCTTCCAGCG CGAGCAGCTC GACCGGGCCT CGACTTTCGC CGATACGTGG
CAGCGCGCTC TCTGGCAGCA TCCCGACATC GACTACACGC TGCAGCGTCC GGTTTCGACG
GTCGGCAAAC GGGCCTGGCT CGACAATCGC AAGGCGGATC GGGATGCTGT CCTGACGAGC
CTCGGCCAGC GCTACGGGCT TTTCTATTTC TATGCGCAAA GCTGCGGCGC CTGCGAGCTC
TTCGCGCCGA TCCTGCGCTC GGTCGCCGAC AGCCATCGGA TGGCGGTCAT GGCGGTCTCG
ATGGATGGTG GCCCGAACAA GGAATTTCCC AACTATGTCG TCGACACGGG CCAGCGTGCC
CGCATGGGAC TGACCGGCAA CGAGACGCCG GCGCTGGTCC TGTTCGACAC CCAGACGAAG
CGGACGATCC CGGTCGGGTA CGGCATCCTC AGCGCCGATG AGATCATGGA CCGGATCTTC
ATGCTCACCA ACACCAAGGT GGGGAGTGAC TACTGA
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| Protein sequence | MSKFTRICAV VLALMPMAVD AQEAGAGRDT IDGQSPDDFY CGERRLGQWF YCSKPKPRET
RPASPQAPEP SAAERMAAIA KELDELKARA ILDPSEENVI AYVRFQREQL DRASTFADTW
QRALWQHPDI DYTLQRPVST VGKRAWLDNR KADRDAVLTS LGQRYGLFYF YAQSCGACEL
FAPILRSVAD SHRMAVMAVS MDGGPNKEFP NYVVDTGQRA RMGLTGNETP ALVLFDTQTK
RTIPVGYGIL SADEIMDRIF MLTNTKVGSD Y
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