Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5343 |
Symbol | |
ID | 5195749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | - |
Start bp | 252305 |
End bp | 252865 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640579270 |
Product | PRC-barrel |
Protein accession | YP_001260218 |
Protein GI | 148550779 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.981987 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCCG CCATGATGAC AGCCGCCAAT CTCGGTGCTC GCGTCACCGG CTGGGGCTTC GTCGTCTTTA CGCTAGGCTC GATCTGTTGG TCCGTGGTCG GGCTCTCGAC CGGGCAGACA AATCTGCTGG CGACCAACGG CTTCCTGACG CTGGTCAACC TGATTGGCAT CTGGCGCTGG CTAGGCCGGC AGCGCGCCTA TGAAGATGGC GGCCAGTCCG CCAGCGAAGC GAGCCGACGC TCGGCGCTGC CCACGCTCTT TACGGCCACC GGGATCACGG GCCTCCCCGT CACGGCATCG GATGGCGAGG TGGTCGGCAC CGTGGTCGAG GCCCTGGTGA CCTGCGCGGA CGGCACCGTG AGCTACGTGG TCATACGCTC AGGCGGCGTG GGCGGCATTG GCGAGACCCT GCGCGCAGTC GCACGCAGCG ATCTCGACTT TGGCTGCAAG GGCTTCACCC TGCATCATGA GAGGACATGG TTCGAGGCGC TGCCTGAGCT CGCCGATGGC GACTGGCCCG CGGCGCCCCA GGCGGCGGGC ACGACGCCCG CACGCAGCTA G
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Protein sequence | MIAAMMTAAN LGARVTGWGF VVFTLGSICW SVVGLSTGQT NLLATNGFLT LVNLIGIWRW LGRQRAYEDG GQSASEASRR SALPTLFTAT GITGLPVTAS DGEVVGTVVE ALVTCADGTV SYVVIRSGGV GGIGETLRAV ARSDLDFGCK GFTLHHERTW FEALPELADG DWPAAPQAAG TTPARS
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