Gene Swit_5343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5343 
Symbol 
ID5195749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp252305 
End bp252865 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content68% 
IMG OID640579270 
ProductPRC-barrel 
Protein accessionYP_001260218 
Protein GI148550779 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.981987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCG CCATGATGAC AGCCGCCAAT CTCGGTGCTC GCGTCACCGG CTGGGGCTTC 
GTCGTCTTTA CGCTAGGCTC GATCTGTTGG TCCGTGGTCG GGCTCTCGAC CGGGCAGACA
AATCTGCTGG CGACCAACGG CTTCCTGACG CTGGTCAACC TGATTGGCAT CTGGCGCTGG
CTAGGCCGGC AGCGCGCCTA TGAAGATGGC GGCCAGTCCG CCAGCGAAGC GAGCCGACGC
TCGGCGCTGC CCACGCTCTT TACGGCCACC GGGATCACGG GCCTCCCCGT CACGGCATCG
GATGGCGAGG TGGTCGGCAC CGTGGTCGAG GCCCTGGTGA CCTGCGCGGA CGGCACCGTG
AGCTACGTGG TCATACGCTC AGGCGGCGTG GGCGGCATTG GCGAGACCCT GCGCGCAGTC
GCACGCAGCG ATCTCGACTT TGGCTGCAAG GGCTTCACCC TGCATCATGA GAGGACATGG
TTCGAGGCGC TGCCTGAGCT CGCCGATGGC GACTGGCCCG CGGCGCCCCA GGCGGCGGGC
ACGACGCCCG CACGCAGCTA G
 
Protein sequence
MIAAMMTAAN LGARVTGWGF VVFTLGSICW SVVGLSTGQT NLLATNGFLT LVNLIGIWRW 
LGRQRAYEDG GQSASEASRR SALPTLFTAT GITGLPVTAS DGEVVGTVVE ALVTCADGTV
SYVVIRSGGV GGIGETLRAV ARSDLDFGCK GFTLHHERTW FEALPELADG DWPAAPQAAG
TTPARS