Gene Swit_5329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5329 
Symbol 
ID5195755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp230618 
End bp231454 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content58% 
IMG OID640579256 
Productphosphoadenosine phosphosulfate reductase 
Protein accessionYP_001260204 
Protein GI148550765 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.176217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCGC GCGGCGACGA GGGGGGCGAG CCCGTCCGCC ATATCCTGAG TCTTTCTGGC 
GGCAAAGACA GCGCGGCGCT CGCCATTTAC CTGCGCGATC GCGTGCCGGA GATGGAGTAT
ATTTTCCACG ATTCCGACAA GGAGTTGCGG GAAACATATG ATTATCTGGG CAGGCTCGAA
GCCATCCTGG GCAAACCGAT CATTCGAACC TCGCCGGTCG ACACATTCGA CCACTGGCTG
GCCGTGTTCG GCGGGATGCT GCCGTCCAAT CATCGGCGCT GGTGCACGAA GATGCTGAAG
CTCAAGCCGT TCGAAAACTA TGTCGGCGAC AGCCCGGTCA TAAATTATGT CGGTCTGCGG
GCCGATGAAA AGCGTGTCGG TTACATCAGC ACCAAGGCCA ATATCACGGC GGTCTATCCG
TTCATCGAGG ACGGCCTCGT GCGCAAGGAC ATCATGCAGA TCCTCGAGGA TTCAGGTCTT
GGCCTGCCTC CCTACATGGA ATGGGGACGT TCGCGCTCTG GCTGTTATTT CTGCTTCTAC
CAGCAGAAAA TCGAATGGGT ACGCCTCTAT GAGATGCATC CCGATCTCTA TGCGCTGGCT
CAGGGCTACG AGGAAAAGGC CGTGGAATAT GGTGAGCAGT TCTACTGGTG TCAGAACGAG
ACGCTGGCCG ATCTCGCCAA GCCGGAGCGA CGTGCGCAGA TCAAGCGCAA TTGGGAGATT
TCCGAGGCGC GCAAGAAGGC CAAGCGCAAG AATGTGGCGC TTGTCGAGAC GTTGGGCGGG
TTGGAGCCGG AGGACGATCC AGGTTTGCGG GATGGCTGCC TGATCTGTTC CCTCTGA
 
Protein sequence
MTARGDEGGE PVRHILSLSG GKDSAALAIY LRDRVPEMEY IFHDSDKELR ETYDYLGRLE 
AILGKPIIRT SPVDTFDHWL AVFGGMLPSN HRRWCTKMLK LKPFENYVGD SPVINYVGLR
ADEKRVGYIS TKANITAVYP FIEDGLVRKD IMQILEDSGL GLPPYMEWGR SRSGCYFCFY
QQKIEWVRLY EMHPDLYALA QGYEEKAVEY GEQFYWCQNE TLADLAKPER RAQIKRNWEI
SEARKKAKRK NVALVETLGG LEPEDDPGLR DGCLICSL