| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5290 |
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| Symbol | |
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| ID | 5195807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | + |
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| Start bp | 190276 |
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| End bp | 191391 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640579217 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001260165 |
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| Protein GI | 148550726 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.716182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.882551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCAC GTTTCAGTTT TGACCGAATG ATCGACGAGG CCACGCATTG GATCGGGGCC
AACTGGCTCG AGATCGCGAT TGCCACCGCC GCGGGCGCGG CGATCTATCT GCTGCTCAAC
CTTGTGCGCG GATGGAGTGT AAAACTGTGC CAGCGGGGCG AAGGCGCGGC GAGCTGGTAC
AGTATCCTGG GGCGAGCCTT CGGACGTACC GGGCAGATCT TCATGATCCT TGTCGCCGCC
CGGCTCGTAG TGGGATACGC CGACGCACCG GCCTGGCTGA CTACCACGGT CGCCACTTTG
TTCACGATCT CCGCGGTATT CCAGGGCGCG CTATGGGCCC GAGAAGTCGT CTTCGGAGCG
ATCGAGCATC GCATGCGCGA CCAGGAGCAT AACAGTCGGG CACTCATGAG CGCCCTTGGC
ATCATACGGC TCCTTGTGAC GATCTCCCTC TTCGCGATCG CGCTCGTGGT GGTGCTGAGC
AATCTGGGGG TGAACGTCAC CGGGCTGGTT ACGGGCCTTG GGATTGGCGG CATCGCGATT
GGCCTCGCGG CACAAGGCAT TTTCGCCGAC TTGTTCGCAG CGCTCGCCAT TCTTTTCGAC
CGCCCGTTTC GCATTGGCGA TTCCATTTCC TATGACAAGG GCGCCGGCTC GGGGACAGTT
GAATCGATCG GTCTCAAGTC GACGCGGATT CGCGGCGGGC CCGGCGAAGA GCGGATTATC
GCGAACAAGA AGCTGCTGGA CTTCGAAATC CTCAACACGA CCCGACGCCT GCGCAACCGT
TTCAAGTTCG AGTTTGTGAT TGGGTACGCT GCGGCGCCGG AAGTCATCCT CAAGATACCG
GGTCTGCTGA AGGACGCGGT CGAAAGCGAA GGCTACACCC TCATACATGG CGGGGTGAAC
GGCTTCGTCT CAAGCGGCAT CAGCTACGAC GTCGAGTTCG AGTCGAAAGA AGCAGACTTC
CCGGCCGATG CACGAGACAG GGTGACCGCG GCGATACTGT CGCGCTTTCG CGATAATGAC
ATCAGCTTCG CTTACCCGAC CCAGGTGAAC TTGCTCGCCG AGAAGACGAA GCCAGACCCG
CCCGCGCAGG TCAGGGAAGA GAGCGGACGG GCGTGA
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| Protein sequence | MDPRFSFDRM IDEATHWIGA NWLEIAIATA AGAAIYLLLN LVRGWSVKLC QRGEGAASWY
SILGRAFGRT GQIFMILVAA RLVVGYADAP AWLTTTVATL FTISAVFQGA LWAREVVFGA
IEHRMRDQEH NSRALMSALG IIRLLVTISL FAIALVVVLS NLGVNVTGLV TGLGIGGIAI
GLAAQGIFAD LFAALAILFD RPFRIGDSIS YDKGAGSGTV ESIGLKSTRI RGGPGEERII
ANKKLLDFEI LNTTRRLRNR FKFEFVIGYA AAPEVILKIP GLLKDAVESE GYTLIHGGVN
GFVSSGISYD VEFESKEADF PADARDRVTA AILSRFRDND ISFAYPTQVN LLAEKTKPDP
PAQVREESGR A
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