| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5288 |
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| Symbol | |
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| ID | 5195740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | + |
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| Start bp | 187727 |
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| End bp | 189580 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640579215 |
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| Product | PEBP family protein |
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| Protein accession | YP_001260163 |
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| Protein GI | 148550724 |
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| COG category | [G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1881] Phospholipid-binding protein
[COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | [TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCTCA GCGCTATCCT CGCCGGCACC TGCGCCGCAC TCGCCCTGTC GACCGCCGCT
TATGCGCAGC AGGGGGATGG CACCGACGTT CAGGTCGCGA TCCATGTCTT CAAGCCGGAC
AAGGCCCCGG CGATACCCGA GCGGCTCGCC GGGCTCAAGA CGCCTGCAGG TTTCACGGTC
ACGACCTTCG CCACGGGCCT CAAGAATCCG CGGATCATTG CCGTGGCGCC CAATGGCGGG
ATCTATGTCA GCCGGCGCGA GCAGGGCGAC GTCGTACTCC TGAAGGACGC CGACGGAAAT
GGCGTGGCCG ATGGGCCGCC GGTGGTCGTT GCGAACCGCC CGAGCGCCCA CGGCCTCGCG
ATCAAGGACA ACAAGCTCTA CATCGCGACG GTGAAGGAGA TTTTCGTCGC CGACATCCGG
CCCGACGGCA TGCTCGGACC GCTCCAGATG ATCGTCGGCG ACTTGCCCGA TGGCGGCCAG
CACCCCAATC GGACGATGGC CTTCGGACCT GACGGCATGC TCTATGTGAG CGTGGGCTCC
ACCTGCAATG CGTGCAACGA GAGCAATCCT GAAAACGCAT CGATCCTGCG TGTCTCGCCC
GATGGGAAGA CCCGGACGAT CTTCGCCCGT AATCTGCGCA ACACGATCGG CTTCGGCTGG
CATCCGGCGA CCGGCGAGCT GTGGGGAATG GACCACGGCA TCGACGATCT CGGCGACGAC
CAACAGCCCG AAGAGCTGAA CCGCATCGAG CAGGGCAAGC AATATGGCTG GCCTCATGCC
TTCGGCGCTG GCGCGATCCA CCCCCAGACG ACCCCGCCCG GGGAGATCAC CAAGGCCCAG
TGGCTTGCGG CAAGCACGCC GATGGTGCTC GGCTACACCG CGCACGCCGC GCCGATGAGC
CTCGTCTTCT ATTCGGGCGG CAATTTCCCG GCCGAGTTCC AGAACGATGC CTTCGTTGCG
ATGCGCGGAT CATGGAACCG CAAACCGGCC TCGGGCTACG AGATCGTACG GATCCGCTTC
CAGAACGGTC AGCCGCAACG CTTCGAGCCC TTTGTCACGG GTTTCCTGAC CGACGACGGG
ACGCGCCATA TCGCCCGTCC CGTTGGCCTC GCCATGCTGA AGGACGGCTC GCTGCTCCTT
TCGGACGATG GCAATGGCAC GATTTTCCGC GTTGCCTACA CGGGCGGGGC CGCAGCCCCC
ACCGCAGCAG CCGTGCCGCC CGCGCAGCCA ATGCTTGCGC AGGCCGCCAA GGGTGTGGGG
GTCCCGCTGG TACTCGACCG GCCCGAGACG GCTGGTGCCC GCGGCCGGAT TGCGGTGCGT
TCGCCCGCCA TCGCGCCGCA GGCGCTGATC CCTGAACGCT ATAGCGAATA TGCCGATGCG
GTGTCGCCGC CGCTTGCGTG GGATCCCGTG CCCGGCGCGC AGTCCTATGT GCTCATCATG
GAGGACCCGG ACTCGCTGCC GATCAATCCG TTCGTCCATT GGGTCGCCTG GAATATTCCG
CCCTCGACGA CCAGCCTTCC CGAAGGTCTG CAGGAGCAGG AGCGGCTGAC CTTGCCGGAT
GGCATGATGC AAGGGCGCAA CAGCCGAAAT ACGCCCGGAT ATTTCGGCCC GCAGCCGCCG
GTCGGTGACC CCGCGCATCG CTACGCATTC CAGGTGCTGG CGCTAGACAA GGCCCTCGAT
CTGCCGATCG GCGCAGACCG CGATCAGGTG CTTGCCGCCG CGCAGGGCCA CGTCATCGCC
AAGGGCTCGC TCGTGGGCCG CTACCGCCAG GCCGAGAAGC CGCCGAAGTC GGGCGTCCTG
CCCGCGGGCG TCGCCAAGAC GGTCGGAACC AAGATGCCCG CGACCCGCCG CTGA
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| Protein sequence | MKLSAILAGT CAALALSTAA YAQQGDGTDV QVAIHVFKPD KAPAIPERLA GLKTPAGFTV
TTFATGLKNP RIIAVAPNGG IYVSRREQGD VVLLKDADGN GVADGPPVVV ANRPSAHGLA
IKDNKLYIAT VKEIFVADIR PDGMLGPLQM IVGDLPDGGQ HPNRTMAFGP DGMLYVSVGS
TCNACNESNP ENASILRVSP DGKTRTIFAR NLRNTIGFGW HPATGELWGM DHGIDDLGDD
QQPEELNRIE QGKQYGWPHA FGAGAIHPQT TPPGEITKAQ WLAASTPMVL GYTAHAAPMS
LVFYSGGNFP AEFQNDAFVA MRGSWNRKPA SGYEIVRIRF QNGQPQRFEP FVTGFLTDDG
TRHIARPVGL AMLKDGSLLL SDDGNGTIFR VAYTGGAAAP TAAAVPPAQP MLAQAAKGVG
VPLVLDRPET AGARGRIAVR SPAIAPQALI PERYSEYADA VSPPLAWDPV PGAQSYVLIM
EDPDSLPINP FVHWVAWNIP PSTTSLPEGL QEQERLTLPD GMMQGRNSRN TPGYFGPQPP
VGDPAHRYAF QVLALDKALD LPIGADRDQV LAAAQGHVIA KGSLVGRYRQ AEKPPKSGVL
PAGVAKTVGT KMPATRR
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