Gene Swit_5284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5284 
Symbol 
ID5195617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp183965 
End bp184459 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content66% 
IMG OID640579211 
Producthypothetical protein 
Protein accessionYP_001260159 
Protein GI148550720 
COG category[S] Function unknown 
COG ID[COG4297] Uncharacterized protein containing double-stranded beta helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAGA TCGAAAGCTT CCTGCTCGGC GAGAATGACT GGGTGCCGAA CAATGCGCGG 
TTGCCGGTCG TCATCTATCG CAGCGCGCTG GACGGCGAGG GCGAAGACCT GGCCGGCCGG
TTCGAGGCCT TGTTCGAGGA TCATGGTTGG CCGCCGGATT GGCGCGACGG CGTATTCGAT
TATCACCATT ATCATTCGAC CGCACACGAG GTTTTGGGCG TGTTCGCGGG CGAAGCGACG
CTCGAGCTTG GCGGGCCAGA CGGGCGCAAG GTGTCCGTCG CAGGCGGCGA TGCGCTCATG
CTGCCGACCG GCACCGGCCA CCGCGCCATC GATGCGAGCG AGAATTTCCA GGTTGTCGGT
GCCTATCCGC GGGGACAGGG CTGGGACATC TGCCGCGAAG CGCCCGACGA TGCGGCGCGC
GCGCGGATGG AGGCGCTTCC CGATCCGAAG CATGACCCCG TTACCGGCGA AATGGGGGCA
AGGACTGGCG CCTGA
 
Protein sequence
MMEIESFLLG ENDWVPNNAR LPVVIYRSAL DGEGEDLAGR FEALFEDHGW PPDWRDGVFD 
YHHYHSTAHE VLGVFAGEAT LELGGPDGRK VSVAGGDALM LPTGTGHRAI DASENFQVVG
AYPRGQGWDI CREAPDDAAR ARMEALPDPK HDPVTGEMGA RTGA