Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5278 |
Symbol | |
ID | 5195676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | - |
Start bp | 175623 |
End bp | 176309 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640579205 |
Product | stability/partitioning determinant |
Protein accession | YP_001260153 |
Protein GI | 148550714 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1192] ATPases involved in chromosome partitioning |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.918296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGTCA TCACGATCGC GCAAAGCAAA GGCGGCGCCG GCAAGACCAC GCTCGCGCTT GCGCTCGCTT CCGAATTCGA GGCTCTCGGC GGTTCAGTCT TCATGCTCGA CGCCGACCGT CAGAACAGCT TGCTCAACTG GTATCGGGAT CGGATGAACG CCGACAGGGC AGGGGAGGGG CGCATCACCG TGGAAGACGC CTCACAACTC CGGGACGCGG ACATTGGACC CGCTATCGCG CGCGCGCGCG ATGCCGCACA GCTTGTCATT GTCGATTCCG AGGGCACTTC GAACTTCAAG ACCGCCTACG CGGCGATGGA CTCCGATTTC GTCGTCATTC CCACGCGCTC ATCGCGCCTC GATCTCGAGC GCACCGTGGA AACCAGCGAC ATGCTGGGCA AGATGTGCGG CGGCGTGCCC TACAGGGTCC TGATCACGCA GACAGGGCAG GTCGCCCGCT CCAAGGCCGA ATGGGAGATC GACAGCCAGA TCAGCAATGC TCTGCCGACC TTCAACGAGC AGATGCATAC GCTCGACGCG TTCCGCGCCA TGTCCAACTA TCGCATGACG CTGGCCGAGG TTGAGGCCGC CGGCCTGGCC AAGACCGAGA AGGCGCGGCG CATCGCGCAA GGCATCCTGG CCGACATACT CAGCGAAATT CAGAACAAGG AGGCCGTCAA TGCCTGA
|
Protein sequence | MPVITIAQSK GGAGKTTLAL ALASEFEALG GSVFMLDADR QNSLLNWYRD RMNADRAGEG RITVEDASQL RDADIGPAIA RARDAAQLVI VDSEGTSNFK TAYAAMDSDF VVIPTRSSRL DLERTVETSD MLGKMCGGVP YRVLITQTGQ VARSKAEWEI DSQISNALPT FNEQMHTLDA FRAMSNYRMT LAEVEAAGLA KTEKARRIAQ GILADILSEI QNKEAVNA
|
| |