| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5276 |
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| Symbol | |
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| ID | 5195802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | + |
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| Start bp | 174080 |
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| End bp | 175195 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640579203 |
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| Product | initiator RepB protein |
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| Protein accession | YP_001260151 |
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| Protein GI | 148550712 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5527] Protein involved in initiation of plasmid replication |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCG ATTCGGACAT CGTTGAGATC GAGGTTTCCC CGGAAGCGGA TGGCCTGAGC
CGGACGCTGC GGGTCGCTGA TGTGATTCGC CGCCGCGATC TCGATTTTGT AAGCAAACCG
GGCGAGCTCG TCGAATCCGA GTTTGAAACC GGCTCCTTGA GCGCCGCCGG GCGTAAGGCC
TTCGCCCTGA TGCTACGCAA GGCTGGGCCA GACGCTGGCG AGGACAGAAA CTTCACGATT
ACCAAGAAGG AGCTGCGCGG ATCGCACAAG GGCAATGAGC GCATCCAGCC CGTGATGGAC
GAGCTTTTGC GCGTGATCGT GCGCATCCGC ACGACGACCA AGAAGGGCAA GCCCGCGATC
ATGTCGCAAT CCCTGCTCTC GAGCTGCGTG GAGGAAATCT CCGAAGACGG CATGAGCGTC
GTGGAGTACG AGTTTTCGGA AGCCTTCAAG CGCGTGATGC AGCGCTCGGA CTATTATGCG
CGGGTCAACC TGGGCGTCAT GCTGGCGCTG CAGTCGCGCT ATTCGCTGAC GCTCTATGAC
CTGGGCTGCC TGATCATCAA CCGGCAGAAC CGCGTCGTGA AGATGGAGGT TGAGGAACTG
CGCCGGCGTC TGGGCGTGCC GGAGGGTAGC TTCAAGAATT TCGCGGAATT CCGCCGCGAT
GTCCTGGCAA AATCGAAGTT GGAGATCGAC CAGCTCGCGG ATTTCACCGT GGAATGGGAC
GAGATCCGTG GATCGGGGCG TGGACGGCCT GTCGAGGCTG TGAAGCTCAC ATTCAGTCCT
AAGGATCCCG TCGATCAGGA GGAAACCGCC AAGGAGCTCG ATCGGCCGAA AGTGGGTCGG
CGTGCCAGGC GGGACGGAAC GGTCGAAACC GTCGCACCGC CGCCCGTCCC CCTGCCCTCG
GCGCGCCCCT TCCCTTCGGG ATCGCTGAAC TTCTGCCCTG ACCAACGCAT CATCACGATT
TTCCGCGATT TTGGCGGAGG CTGGGACAAG GACATGATTG CCGATGCCTA CAGGCAGAAA
ATGGGCGCAA AGCTGGAGAC CCTGACGGGC GCCGCTCTCT ACAAATCGTG GGAAGGCTTC
TGCAAAAGCT GGGTCGCGAT GCGCGGGACG CCCTGA
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| Protein sequence | MKPDSDIVEI EVSPEADGLS RTLRVADVIR RRDLDFVSKP GELVESEFET GSLSAAGRKA
FALMLRKAGP DAGEDRNFTI TKKELRGSHK GNERIQPVMD ELLRVIVRIR TTTKKGKPAI
MSQSLLSSCV EEISEDGMSV VEYEFSEAFK RVMQRSDYYA RVNLGVMLAL QSRYSLTLYD
LGCLIINRQN RVVKMEVEEL RRRLGVPEGS FKNFAEFRRD VLAKSKLEID QLADFTVEWD
EIRGSGRGRP VEAVKLTFSP KDPVDQEETA KELDRPKVGR RARRDGTVET VAPPPVPLPS
ARPFPSGSLN FCPDQRIITI FRDFGGGWDK DMIADAYRQK MGAKLETLTG AALYKSWEGF
CKSWVAMRGT P
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