| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5272 |
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| Symbol | |
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| ID | 5195820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | - |
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| Start bp | 167881 |
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| End bp | 168726 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640579199 |
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| Product | spermidine synthase-like protein |
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| Protein accession | YP_001260147 |
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| Protein GI | 148550708 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTTCG ATTTGCGGTT CGATCGGCCT GCGCCAGGCA GCAATCTCGA GGGCCGCTTC
CGGGGCGCGG GGAACATCCC GATCGCGCTC GACGCGCCTT TTGGCGAGAC GGGGCCGATG
CTGTTCCGGT TCGGTGACAT GTTGTCGCTC CTCTTCGACT GGACCACCGT TCAGAGCGGC
ATGCGGATCA GCGATCCCGA CCATCTCCTG TTCGACTATA CGCGCATGAT GATGGGCTTC
CGCCTGTTCC GACCCGCGCC GCGAAAGATC GAAATGATCG GGCTGGGTGG CGGATCGCTC
GCCAAGGCCT GCTATCGCTG CCTGCCCCAG TGCGACATCA CCGTGGTCGA GATCGATCCT
GCAGTCATCG CCCTGCGCGA GCAGTTCCAC ATTCCGCCCG ACAATGACCG GTTCCGCGTG
ATCTGCGCCG ATGGCCTGGA CTATATCCTC AGCGCCCCCG GCGCGCCCGA CATCCTTATT
CTCGACGGCT TTGACAGCCG GGGCCTTCCC CCGGCGCTGA GCGAGCGGTC CTTCTACGAC
AGCTGCCGAA ATCGCCTCGG CAGAAACGGG CTGCTAGTGG CCAATCTGTG CGACAATGCC
ATGGCCTTTG CCACGCTCGA ACGCCGTATC GGGGCCAGCT TCGAGAACCG CACGATCGTC
GTTCCGGCCG AAAATGGCGG GAACCGTGTC GTCTTCGCGA GCATCGACCG CGGGTTTCCA
CCCGCGCGCC AGACCGTTCG CGGCCATCTG CCCGATACGG ATGTCGTCGA TTACGATGCC
AAGGCTCGCA GGGTCGTCCG AGCCCTTGCG CGCGCTTCGC TCAAGGTGCC CCGAACCGAG
CATTAA
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| Protein sequence | MVFDLRFDRP APGSNLEGRF RGAGNIPIAL DAPFGETGPM LFRFGDMLSL LFDWTTVQSG
MRISDPDHLL FDYTRMMMGF RLFRPAPRKI EMIGLGGGSL AKACYRCLPQ CDITVVEIDP
AVIALREQFH IPPDNDRFRV ICADGLDYIL SAPGAPDILI LDGFDSRGLP PALSERSFYD
SCRNRLGRNG LLVANLCDNA MAFATLERRI GASFENRTIV VPAENGGNRV VFASIDRGFP
PARQTVRGHL PDTDVVDYDA KARRVVRALA RASLKVPRTE H
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