Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5266 |
Symbol | |
ID | 5195794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | + |
Start bp | 160490 |
End bp | 162709 |
Gene Length | 2220 bp |
Protein Length | 739 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640579193 |
Product | hypothetical protein |
Protein accession | YP_001260141 |
Protein GI | 148550702 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGGAA AAGCGCAAAT GGACCGGCTC AAGAGCGGCG TCCCGGTGGC GGTGGTTCTC CTCCTTGCGG CGATGGGCTT CTTCGCACTG TCGCACCTCC TGCGCGAAGT GCACATGCAC GACATCCGGG CAGCTTGGGC GCAAGTGGGC GTCCTTCATC TGCTCGCGGC GGCGGGACTT ACCGCAATCA GCTATCTGGC GTTGACGCTC TACGACGTGC TGGCGCTGCG CGCGATCGAT CGTCCCCTGC CCTATCGCGT CGCGGCGCTG GCCTCGTTCA CAAGCTATAC GCTCAGCCAT AATCTGGGTC TGGCGCTCTT CACCGGCGGC TCGGCCCGCT ACCGGATCTA TAGCGCGCAC GGCCTGGGCG CGGGCGATGT GGGCCGCGTG GTCGCGATCG CCGGGCTGAC CTTCTGGGGC GGCGTCTTCA CCCTTGCCGG GGCGATGCTG GCGCTCTTTC CCGGCGGCCT TGGCTTTGCC GGCTTCGCGC CCTCGCCCTG GGTCTGGCGA GCAAGTGGCC TCGCGCTCCT TGCCCTCATC ATCGGTGCGC TTGCCTGGTC AGGACCCTCG GGCCGGACTG TCCGGATCTG GAAATGGGAT TTGCGGATCC CGGGCTACCG GACGGCGCTC GCCCAGCTTG GCGTCGCCAC GGTCGATCTC ATGGCCGCGA GCGCGGCCCT GCTGGTGCTG GTCCCGGGCG CTAGTCTTGC CGACTGGCCG GTCTTCTTCA TCGGCTACAT ATTGGCGATC ATTGCGGTAC TCGTAACCCA CGTGCCGGGC GGCCTCGGCG TTTTCGAAGC GGTCATCGTG GCAGCCCTGC CGGCAACGCC GCGCCCGGAG CTCATCGCCG CGCTGCTCGG CTACCGGCTG GTCTACTATA TCCTGCCCCT GCTGATCGCA GGGGTCATCA TCGCCGTGCA GGAAGGCGCG CGCTGGCGGC GGCCGATGGC TGCGACGTTG CACGGCGCCC AGACGATCGC CTCGGGCATA GCGCCGACGC TGGTCGCGGC CCTTGTCTTC CTGGGCGGCA TGGTCCTGCT GGTCTCGGGC GCGCTGCCCG CCGAGCATGA TCGCATGGCG GCGCTGGCAG CGATCCTGCC CTTGCCGCTG GTGGAAATAT CGCATCTCGC CGGCAGCGTC GTCGGCGCCG CGCTGCTCCT GGTGTCGGCG GGCCTTTATC GTCGCCTCGA TGGGGCGGCC TGGCTGACAG GCCTGCTGCT GCTCATCGGC GCGCTGGTCT CGCTCGCCAA GGGCCTCGAC TATGAGGAGG CGATCCTCAT GCTGCTGCTC GCGGGCGTCC TGCGCTGGAC GCGGGGCGCC TTCTACCGCC GGACGCGGCT GACGCAGGAA GTGCTGACGC CGAGCTGGCT CGCGAGCGTG GCGCTGATGA TCGGCCTGCC GATCTGGGTC GGCTTCTTCG CCTATAAGCG CGTGCCCTAC AGCACCGATC TCTTCTGGCG CTTTTCGGAG CATGGCGACG CCTCGCGCTT CCTGCGCGCC AGCCTCGGCG TGGGCCTCGC GCTGGCCGCC CTCGCAGTCT GGCGGCTGCT GCGCCCGGCC CCCGTGGCGG GTCCGGGGCT CGTCAGCCTG GAGCCGCCGC AGGGCGAAGC GATGGCGCTC ACGCACCGCA CCGATGCCAA TCTCGCCTAT ACGGGCGACA AGCGGTTCCT GTGCTCGCCT TCGGGCCGCG CCTTTGTCAT GTACCAGGTG CGCGGGGCAA GCTGGATCGT GATGGGCGAT CCGGTCGGGG ATCCCGCCGA ATGGAGCGAA CTCCTCTGGC AGCTGCGCGA AGGGGCGGAC GCGGCGCAGG GCCGCTTGCT ACTCTACCAG ATCAGCCTGC AGGCCTTGCC CGTGGCGATC GACCTGGGCT TGCAGATCGT CAAATATGGC GAAGAAGCGC GGGTCGATCT TGCCGCCTTC ACGCTCGACA CGCCGTCGGC CAAGCCGCTG CGCTATGCGG TGCGCCGCGC GGAGAAGGAA GGCGCGCGCT TCGCGATCAT CGCGCGAGAC GAGCTTGCCG CGCATCTGCC GCGGCTGCAG GAGATTTCCG AAAGCTGGCT GCGCGAGAAG GGCCACCGGG AAAAGGGGTT CAGCGTTGGC CGCTTCGACC CGCCTATCTC GCCCGCTTCG ACTGCGCGGT CGTCCTGCGC GAGGAGAAGA TTGTCGCCTT CGCCAATATC TGGGCGACGC AGGATCGCTC CGAGCTGTCG ATCGACCTGA
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Protein sequence | MIGKAQMDRL KSGVPVAVVL LLAAMGFFAL SHLLREVHMH DIRAAWAQVG VLHLLAAAGL TAISYLALTL YDVLALRAID RPLPYRVAAL ASFTSYTLSH NLGLALFTGG SARYRIYSAH GLGAGDVGRV VAIAGLTFWG GVFTLAGAML ALFPGGLGFA GFAPSPWVWR ASGLALLALI IGALAWSGPS GRTVRIWKWD LRIPGYRTAL AQLGVATVDL MAASAALLVL VPGASLADWP VFFIGYILAI IAVLVTHVPG GLGVFEAVIV AALPATPRPE LIAALLGYRL VYYILPLLIA GVIIAVQEGA RWRRPMAATL HGAQTIASGI APTLVAALVF LGGMVLLVSG ALPAEHDRMA ALAAILPLPL VEISHLAGSV VGAALLLVSA GLYRRLDGAA WLTGLLLLIG ALVSLAKGLD YEEAILMLLL AGVLRWTRGA FYRRTRLTQE VLTPSWLASV ALMIGLPIWV GFFAYKRVPY STDLFWRFSE HGDASRFLRA SLGVGLALAA LAVWRLLRPA PVAGPGLVSL EPPQGEAMAL THRTDANLAY TGDKRFLCSP SGRAFVMYQV RGASWIVMGD PVGDPAEWSE LLWQLREGAD AAQGRLLLYQ ISLQALPVAI DLGLQIVKYG EEARVDLAAF TLDTPSAKPL RYAVRRAEKE GARFAIIARD ELAAHLPRLQ EISESWLREK GHREKGFSVG RFDPPISPAS TARSSCARRR LSPSPISGRR RIAPSCRST
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