| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5248 |
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| Symbol | |
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| ID | 5195779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | + |
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| Start bp | 136172 |
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| End bp | 138379 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640579176 |
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| Product | catalase |
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| Protein accession | YP_001260124 |
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| Protein GI | 148550685 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0753] Catalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.405546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGGA AACCCGCGAC CGACAAAGAT GTGCTCGTTC CTGCCGACAT TGCGCCTGGC
AAGCCCGTCT CGGGAGAGTC GCGGCAGAAG GCCTCGCCGG TGCCCGCCGA CGCACAGCTG
TCGGAAAGCT ATGCTGAAAA ACAGGGAGAC GGCGGTGAGA CCCACCAGGT CGCAGCCGAC
GGCGCGCCGG TGCTCACCAC GGGCCATGGC GCTCCGGTCG CCGACGACCA GAACAGCCTG
AAGCAGGGTG CGCGCGGCCC GACGCTGCTC GAGGACTTCC ACTTTCGCGA GAAGATCTTC
CACTTCGACC ATGAGCGGAT CCCCGAGCGC GTGGTCCATG CCCGCGGCTA TGGCGCGCAC
GGCTTTTTCG AGCTGACCGA CAGCCTGGCG GACGTGACCC GCGCCGACAT CTTCCAGCGC
GTTGGCGAGC GCACGCCGGC CTTCGTGCGC TTCTCGACCG TGGCGGGCTC GAAGGGTTCG
TTCGATCTCG CGCGCGATGT GCGCGGCTTC GCCGTCAAGC TCTATACCAA GGAAGGCAAC
TGGGACCTGG TCGGCAACAA CATCCCGGTC TTCTTCATCC AGGATGCGAT CAAGTTTCCC
GACCTCGTCC ATGCGGCAAA GCCCGAGCCT GACCGCGCCT TCCCGCAGGC GCAGACCGCC
CATGACAATT TCTGGGATTT CATCAGCCTG ACGCCCGAGT CCATGCACAT GATCATGTGG
GCCATGTCGG ACCGGGCGAT CCCGCGCTCG TTCCGCACGA TGGAGGGCTT TGGCGTCCAT
ACCTTCCGGC TCGTCAGCGC CGAGGGCAAG TCGACCTTCG TCAAGTTCCA CTGGAAGCCC
AAGCAGGGCC TGCAGTCGGT GCTGTGGAAC GAGGCGGTCA AGATCAACGG CGCCGACCCG
GACTTCCATC GTCGCGATCT GTGGGAAGCG ATCAATGGCG GCGACTTTCC CGAATGGGAG
CTCGGCGTCC AGCTGTTCGA CCAGGCCTTT GCCGACCAGT TCGATTTCGA CGTGCTCGAT
GCGACCAAGA TCATTCCGGA AGAGATCCTG CCCGTCCGGG TCGTGGGCCG TCTGGTGCTT
GACCGGGTCG TCGACAATTT CTTCGCCGAG ACCGAACAGG TCGCCTTCTG CACGCAGAAT
GTCGTGCCCG GCATCGACTT CACCAACGAC CCGCTGCTCC AGGGGCGTAA TTTCTCCTAC
CTCGATACGC AGCTCAAGCG CCTGGGCTCG CCCAACTTCA CTCATATCCC GATCAACGCG
CCCAAATGCC CCGTGGCCCA TTTCCAGCAG GACGGGCACA TGGCGATGAC CAACCCCCGG
GGGCGGGTCA ATTATGAGCC CAACAGCTGG GGTGCGACGC TCGGCGGACC GCGCGAGGAT
CCGGTCCGGG GGTTCCGGAG CTTCGCCGAG GAGGCTGATG GCGCCAAGCT GCGCATCCGC
CCGGAAAGCT TTGCCGATCA CTACAGCCAG GCCCGGCAAT TCTATGTGAG CCAGGAGCCG
ATCGAGCAGA AGCATATCGC CGATGCCCTG GTTTTCGAGC TCAGCAAGGT CGAACGGCCG
GACATTCGCG CCCGTGTCGT CTCGCACCTG ATCAACATCG ACGACGGCCT GGCCGGCACC
GTCGCGGACG GCCTGGGCCT TCCCGAATTG CCCGCGCCCG CACAGGCCGC GCAGCCGACC
CGGGGCGACT TGCCCCCGTC CGAAGCACTG TCGATCGTGA AGAACGGACC GCCGAGCTTC
AAGGGGCGCA AGCTGGGCAT TCTCCTGAGC GACGGCGCCG ATGCCGCGCT GTTTGGCGGC
CTCGTCAAGG CGCTCGACAA GGTGGGCGCG GTCTATGACG TGATCGCTCC CAAGATCGGC
GGCGTGACGC TCGATGATGG GACCAAGGTT GCGGCCAAGC AGAAGATCGA CGGCGGACCT
TCGGTGCTGT TCGACGCGGT GGCCATCGTC GTCTCGGCCG ACGGCGCGGC GCTGCTTGCC
GATGACGCCG CCACGCAGGA CTTCGTGCGC GATGCCTTTG GCCATTGCAA ATATATCGGC
CTCACGCTCG ATGCGCAGCC GATCTTTGCC AATGCCGGCA TCCTCGAGAA GCTCGACGAT
GCCTGTATCG AGCTTGGCGC AGCCAAGGAT GCCACGGCCT TCGTCGATAC GATCGCGGCG
CTGCGCTTTT GGCCCCGCGA ACTCAAGGTC GACCTGGATG CCAAATGA
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| Protein sequence | MPRKPATDKD VLVPADIAPG KPVSGESRQK ASPVPADAQL SESYAEKQGD GGETHQVAAD
GAPVLTTGHG APVADDQNSL KQGARGPTLL EDFHFREKIF HFDHERIPER VVHARGYGAH
GFFELTDSLA DVTRADIFQR VGERTPAFVR FSTVAGSKGS FDLARDVRGF AVKLYTKEGN
WDLVGNNIPV FFIQDAIKFP DLVHAAKPEP DRAFPQAQTA HDNFWDFISL TPESMHMIMW
AMSDRAIPRS FRTMEGFGVH TFRLVSAEGK STFVKFHWKP KQGLQSVLWN EAVKINGADP
DFHRRDLWEA INGGDFPEWE LGVQLFDQAF ADQFDFDVLD ATKIIPEEIL PVRVVGRLVL
DRVVDNFFAE TEQVAFCTQN VVPGIDFTND PLLQGRNFSY LDTQLKRLGS PNFTHIPINA
PKCPVAHFQQ DGHMAMTNPR GRVNYEPNSW GATLGGPRED PVRGFRSFAE EADGAKLRIR
PESFADHYSQ ARQFYVSQEP IEQKHIADAL VFELSKVERP DIRARVVSHL INIDDGLAGT
VADGLGLPEL PAPAQAAQPT RGDLPPSEAL SIVKNGPPSF KGRKLGILLS DGADAALFGG
LVKALDKVGA VYDVIAPKIG GVTLDDGTKV AAKQKIDGGP SVLFDAVAIV VSADGAALLA
DDAATQDFVR DAFGHCKYIG LTLDAQPIFA NAGILEKLDD ACIELGAAKD ATAFVDTIAA
LRFWPRELKV DLDAK
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