| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH9_0556 |
|---|
| Symbol | |
|---|
| ID | 5168828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009487 |
|---|
| Strand | + |
|---|
| Start bp | 614834 |
|---|
| End bp | 615403 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 640564907 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_001245936 |
|---|
| Protein GI | 148266993 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.118531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAATATG ATTTGACAAC TCAAGACAGT ACAATCAAAC GTAACAATTC AATAAATGAT
AAAGACTTCG AAAAGTTAGT AATGGATCTA CAACCATTAA TTATTCGACG CATCAAAACA
TTTGGATTTA ATCATTATGA TTTAGAAGAC TTATATCAAG AAATACTTAT ACGGATGTAT
AGGTCGGTCC AAACATTTGA TTTTAGTGGA GAGCAGCCTT TCACAAATTA TGTTCAATGT
TTAATTACGT CTGTAAAGTA TGATTATTTG AGAAAATATT TAGCTACAAA TAAAAGAATG
GATAATTTGA TTAATGAATA TAGAGTTACG TATCCATGTG CAATAAAGCG TTTTGATGTT
GAAAACAATT ATTTGAATAA ATTAGCAATT AAAGAGTTGA TTTGTCAGTT TAAGTATTTG
AGTGCATTTG AAAAAGATGT CATGTATTTA ATGTGTGAAC AATATAAGCC GAGAGAAATT
GCTCAATTGA TGCATGTAAA AGAGAAAGTG ATTTATAATG CCATACAACG ATGTAAAAAT
AAAATAAAAC GTTATTTCAA AATGATTTGA
|
|---|
| Protein sequence | MKYDLTTQDS TIKRNNSIND KDFEKLVMDL QPLIIRRIKT FGFNHYDLED LYQEILIRMY
RSVQTFDFSG EQPFTNYVQC LITSVKYDYL RKYLATNKRM DNLINEYRVT YPCAIKRFDV
ENNYLNKLAI KELICQFKYL SAFEKDVMYL MCEQYKPREI AQLMHVKEKV IYNAIQRCKN
KIKRYFKMI
|
|---|
| |