Gene SaurJH9_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH9_0106 
Symbol 
ID5168039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH9 
KingdomBacteria 
Replicon accessionNC_009487 
Strand
Start bp126370 
End bp127626 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content39% 
IMG OID640564436 
Productmajor facilitator transporter 
Protein accessionYP_001245489 
Protein GI148266546 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATC AGTCTATATG GCGCAGTAAC TTTCGCATTT TATGGCTCAG TCAGTTTATA 
GCGATTGCTG GACTGACAGT ACTTGTGCCA TTATTGCCAA TTTATATGGC ATCACTACAA
AATCTATCAG TCGTAGAAAT ACAGTTGTGG AGTGGTATAG CGATTGCTGC TCCAGCTGTA
ACGACGATGA TAGCTTCGCC GATATGGGGG AAGCTAGGTG ATAAGATCAG CCGAAAATGG
ATGGTCTTAA GAGCGTTACT TGGTTTGGCG GTATGCTTAT TTTTAATGGC ATTGTGTACG
ACACCATTAC AGTTTGTACT TGTGAGGTTA TTGCAGGGAC TATTTGGTGG TGTTGTTGAT
GCATCAAGTG CGTTTGCGAG TGCAGAGGCG CCAGCTGAAG ATCGTGGAAA GGTATTAGGA
AGACTGCAAA GTTCAGTCAG CGCAGGGTCT CTTGTGGGGC CATTAATTGG CGGTGTTACA
GCTTCGATAT TAGGTTTTAG TGCGTTACTG ATGAGTATTG CCGTTATTAC TTTTATTGTC
TGTATTTTCG GTGCATTAAA ATTGATTGAA ACGACACATA TGCCAAAATC ACAAACACCA
AATATTAATA AAGGTATTCG CCGTTCATTT CAATGTCTAT TATGCACACA ACAAACATGT
CGATTTATTA TCGTTGGCGT TTTAGCAAAC TTTGCTATGT ATGGCATGCT AACTGCATTA
TCACCACTTG CTTCATCAGT GAATCATACA GCGATAGATG ACCGTAGTGT GATTGGATTT
TTACAGTCCG CATTTTGGAC GGCTTCGATA TTAAGCGCGC CTTTATGGGG ACGCTTTAAT
GATAAATCAT ATGTTAAATC AGTATATATA TTTGCCACGA TTGCATGTGG TTGTAGTGCG
ATACTGCAAG GTTTAGCGAC GAATATAGAG TTTTTAATGG CTGCAAGAAT ACTTCAAGGA
TTAACATATA GTGCATTGAT TCAAAGTGTC ATGTTTGTTG TCGTGAATGC GTGTCATCAA
CAACTTAAAG GCACATTTGT TGGAACGACG AACAGTATGT TAGTTGTTGG TCAAATTATT
GGCAGTCTTA GTGGCGCTGC CATTACAAGT TATACTACAC CAGCTACTAC GTTTATCGTT
ATGGGCGTAG TATTTGCAGT AAGTAGTTTA TTTTTAATTT GTTCAACCAT CACTAATCAA
ATCAACGATC ACACATTAAT GAAATTATGG GAGTTGAAAC AAAAAAGTGC AAAATAA
 
Protein sequence
MINQSIWRSN FRILWLSQFI AIAGLTVLVP LLPIYMASLQ NLSVVEIQLW SGIAIAAPAV 
TTMIASPIWG KLGDKISRKW MVLRALLGLA VCLFLMALCT TPLQFVLVRL LQGLFGGVVD
ASSAFASAEA PAEDRGKVLG RLQSSVSAGS LVGPLIGGVT ASILGFSALL MSIAVITFIV
CIFGALKLIE TTHMPKSQTP NINKGIRRSF QCLLCTQQTC RFIIVGVLAN FAMYGMLTAL
SPLASSVNHT AIDDRSVIGF LQSAFWTASI LSAPLWGRFN DKSYVKSVYI FATIACGCSA
ILQGLATNIE FLMAARILQG LTYSALIQSV MFVVVNACHQ QLKGTFVGTT NSMLVVGQII
GSLSGAAITS YTTPATTFIV MGVVFAVSSL FLICSTITNQ INDHTLMKLW ELKQKSAK