| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1785 |
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| Symbol | |
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| ID | 5171525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1794921 |
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| End bp | 1796438 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640564306 |
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| Product | DNA mismatch repair protein MutS domain-containing protein |
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| Protein accession | YP_001245361 |
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| Protein GI | 148270901 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0257213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTCTTC CCAGCGTTCT TTTTGTGGAC TCCGTGAGAA CCATTCAAGT TTCCCAAGAA
ACCCTAAGAG ACTTGAGACT TGATCGTGTG GTTCGAGAGA TCGTTCAGGA ACGGAATGAT
ATTTTAGAGT ATTACCTCTC ACCTGTTCAG GATGAGAAAA CCGTAAGGTA CCGCCAGGAA
GTGATGAAAG ATTTGGAAAA CAACGAAAAA TTGCTGGAAG CCATCAGGAA GTTCGCAAAA
GATATGGCAT CGTTTCATCG ACATATGAAA ATGGTAGAGC AACTGGAGTA CGAGTACAAC
AGAAAAGGAT GGTTCCTGGA GACAGTCCTG ATATATTGCG ATGCGGTATC CGAACTGTCA
CGCGCTATGA ACACTGCTAA ACTCCAATCC TCTGGACTGA GAAAATTTCG AGAGTACCTG
AAAAGCTACG TTCGTTCTTC TTCCTTCGTT TCTCTTAAAG AAGAGGCTCA AAATGTGAAA
CTGAAGCTCT CAAATGTAAA CTACTGTATC ATTATAAAAC CCGGCATGTT CACGGTGAAA
CCCTACGAAG GAGAAAAAGA ATACTCCCCG GAGATAGAGA AGGTGTTCTC AAGATTCAAC
CGCGAGAAAT GCGCGGACGA GTTTCAATTC GATATTGAAG AGGGACTGGG GATGAGCCAT
ATTGAAGCAA GGATTCTGGA GTTCGTATCG AGATTGTATC CAGAGCCCTT TACAACACTT
GACCTTTTTT GCGAAAGAAA CGGGCGTTTT ACTGATAAAG TTATTCTGAA CTTTGAGAGG
GAAATACAGT TTTATCTCTC GTACTTGGAT TTCATGGAAC CTCTGAGAAA AAAGGGATTA
CCTTTCTGCT ATCCTGAGGT GTCTTCTGAT AAAAGCGAAT ACGTGGAAGA CGCTTTCGAC
ATAGCACTAG CCAGTGGTTT GCTGGATACC AGGCAGCTTG TTTTCAATGA TTTTTATCTT
GAAAACTCAG AGAGGGTGAT CGTCGTGACA GGACCGAACC AGGGTGGTAA AACAACCTTC
GCAAGGATGA TTGGTCAACT TCATTATCTT GCCGCCCTGG GACTTCCCAT TCCCGCGAGA
CGAGCGCGTT TGTTTTTACC CGACGCTATC TTCACTCATT TCGAAAGAGA GGAAAGGGTG
CAGGATCAAA TGAGCAAACT AGAAAACGAC ATCCTCCGTG TAAAAGACAT CCTCGAAAGC
ACTTCCTCCG AAAGTTTGAT CATATTGAAT GAGATTTTTT CTTCGGCTGC ACTGAGTGAT
GCTCTGTTTT TGAGCAAAGA AATTATGAAA ACTATTTTGG AACGTGATTG CTTGTGTGTA
TGGGTTACCT TCCTTGATGA ACTATCCAGA ATGAATGAGA AAATTGTGAG CATGGTCGCA
ACTGTCTCCC CTCAGGATCC AGCTGTGAGA ACTTTCAAAA TCATCAGAAA ACCGGCTGAT
GGACGATCGT ACGCTGTTTC GCTGGCGGAA AAGTATGGTC TCACATATTG GAAAATAAGG
GAGCGTGTTG AACCATGA
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| Protein sequence | MILPSVLFVD SVRTIQVSQE TLRDLRLDRV VREIVQERND ILEYYLSPVQ DEKTVRYRQE
VMKDLENNEK LLEAIRKFAK DMASFHRHMK MVEQLEYEYN RKGWFLETVL IYCDAVSELS
RAMNTAKLQS SGLRKFREYL KSYVRSSSFV SLKEEAQNVK LKLSNVNYCI IIKPGMFTVK
PYEGEKEYSP EIEKVFSRFN REKCADEFQF DIEEGLGMSH IEARILEFVS RLYPEPFTTL
DLFCERNGRF TDKVILNFER EIQFYLSYLD FMEPLRKKGL PFCYPEVSSD KSEYVEDAFD
IALASGLLDT RQLVFNDFYL ENSERVIVVT GPNQGGKTTF ARMIGQLHYL AALGLPIPAR
RARLFLPDAI FTHFEREERV QDQMSKLEND ILRVKDILES TSSESLIILN EIFSSAALSD
ALFLSKEIMK TILERDCLCV WVTFLDELSR MNEKIVSMVA TVSPQDPAVR TFKIIRKPAD
GRSYAVSLAE KYGLTYWKIR ERVEP
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