| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1675 |
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| Symbol | |
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| ID | 5170103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1670476 |
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| End bp | 1671276 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640564201 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001245256 |
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| Protein GI | 148270796 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00609311 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGTGA TAAAATCTTT CGAGAAGAAA GGAGGTGTTG ATATGAAGGA AGAAAGGCTC
AAGGAAATTC TTGACATAGT GGACAAAAAC GGTTTCATCA GCATGAAAGA TCTTCAGGAA
CAACTCGGCG TTTCGATGAT CACCGTGAGA AGAGACGTGG CAGAACTGGT GAAAAGGAAT
TTGGTGAAAA AAGTACATGG TGGCATAAGG AAGGTGAATT ATTTTGAAAA GGAAACAGAT
TTCATGAAAC GACTCTCAAT AAACAGAGAA GCAAAAGAGA AAATTGCCCA GCTTGCGCTG
AACTTCGTTG AAGATGGAGA CATTATCTTT CTGGACGCAA GCACCACTGC GCATATCTTT
GCCAAACACC TGGCCTCGTC TCAAAAGTCC GTTCACGTTA TCACAAACAA CCTGCTCACT
GCAATGGAGC TCTCGAAGAA CTCCGATATA AGCGTTGTTC TGCTCACAGG AAAGGTGAAT
CCGGAGAACC TGGCTGTGGA AGGCTCTCTG ACGATAGAGT GTGGGAAAAA ATTCTCCGTG
AAAAAAGCCT TTGTCTCCTG TAGAGGAGTG ACTGCGGAAG AAGGAACCTA CGAAATAAAC
ACCATGGAAA TGGGAATAAA AGGAATTTTC GTGGAAAGAG CGGAAGAGAT CTTCGTACTC
GCTGACTTCA GCAAAATAGG AAAAAGATCG CTGGCACATC TGATACCCGC AGAAAAAATC
GATCATCTCA TCACCGACAG AAAACCTCCA GAAAATCAGT ATGAAATATT CAGGGAAAAA
GGTGTGGAAA TTGTTTATTG A
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| Protein sequence | MFVIKSFEKK GGVDMKEERL KEILDIVDKN GFISMKDLQE QLGVSMITVR RDVAELVKRN
LVKKVHGGIR KVNYFEKETD FMKRLSINRE AKEKIAQLAL NFVEDGDIIF LDASTTAHIF
AKHLASSQKS VHVITNNLLT AMELSKNSDI SVVLLTGKVN PENLAVEGSL TIECGKKFSV
KKAFVSCRGV TAEEGTYEIN TMEMGIKGIF VERAEEIFVL ADFSKIGKRS LAHLIPAEKI
DHLITDRKPP ENQYEIFREK GVEIVY
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