| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1670 |
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| Symbol | |
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| ID | 5170052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1663833 |
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| End bp | 1666793 |
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| Gene Length | 2961 bp |
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| Protein Length | 986 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640564196 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001245251 |
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| Protein GI | 148270791 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGG AAGAACTGAA AAATCCGGGT GTGTGGTACA GACCCGCTCC CTTCTGGAGC
TGGAACGATA AGTTGTGCGA GGAGGAACTT CTAAGGCAGA TAGACGAAAT GTATGAGAAG
GGCTACGGAG GCTTCTTCAT GCACTCGAGA GTGGGGCTTG TAACGGAATA CCTCTCTGAG
GAGTGGATGA GACTCGTAAG AAGCTGTGCA GAACACGCCA GAAGACTCGG GATGCTCGCC
TGGCTCTACG ATGAGGACAA ATGGCCTTCC GGATTCGCTG GAGGAATCGT GCCACTCGAA
AAACCGGAAC ACAGGCACAA ATACCTCACA CTCTTGAAAA AGGATCAGAT CAAACCAGAA
GATGAGATCC TGAAAAAGAT AGAAAGAGAC GGCGAAGAAT TCTACGTGGT AAAACGCGTT
ATGAAGCTTG GTGATCCGTG GTTCAACGGA ACCTGCTACG TCGATCTGCT CTCAAGAGAG
ACCACAGAGG CGTTTCTCAG ATCGACACAC GAGAGATACA AAAAATCGTG CGGTGATCTT
TTCAGAGTCT CCATCCCCGG GATCTTCACC GATGAACCCA CCTATCTGAG AGTGCATCAC
CCTAAAGAAA CCACACTCCC CTGGACAGAA CGATTTCCAG AGGAGTTTTT GAGGCGAAAG
GGATACGACA TCAGAGACCA CTTAGAAGAA CTCTTCTTCA ACGTGAAGGA CTACATGAAG
GTGAGATACG ATTTCTTCGA TGTTGCGACG AGTCTGTTCA TCGAAAACTT CACGATCCCG
TACGCGAAGT GGTGTGAAGA AAACGGCATC TTCATGACGG GACACTACAT GGCAGAAGAT
ACACTCAGAG GACAGGTGGA GTGGATAGGT GCCGCGATGC CACACTACGA ATACATGCAG
ATACCGGGAA TAGACAAACT CGCCAGACAC CTGGAACAGG TGGTCACGAT AAAGCAGGTT
TCATCGGCGG CAGAGCAGTT AGGGAAGAAA TGGGTGCTCT GCGAAACGTT CGGTACAACG
GGTCAGCACG TGAGTTTTCT GCACAGAAAA TGGATAGCGG ACTGGCAGGC GGTTCTCGGT
GTCACGTACA TAAACCCGCA TCTCAGTCTT TACTCGATGA GAGGAGAGAG AAAGAGGGAC
TACCCACCGA ATCTCTTCTA TCAACAGCCT TGGTGGAAGA ACGAAAGATT CCTGTCGGAT
TACTTTGCAA GACTGAACCA CATCGTCACA CAGGGAAAGA GAGAGGTCAA AGTGCTCATG
ATACATCCCA TCTCCTCAGC GTGGTGTGTG TATTCTAAGT TCGATGACGA GATCGATAAG
CTCAACGAGC TCTTCGATAC GATCACAAAG GAACTCGTTG CGAACAAGAT AGACTTCCAC
TTCGGCGACG AGATGATCCT CTCAAAACAT GGAAGAGTGA AAGAGGCAAA ACTGAGAGTA
GGAGAGTACG AATACGAAGT CGTGGTGCTG CCACCGCTCC TGAATCTGAA AAGTTCTACT
GTGGAACTTT TGAACTCACT GGCAGAAAAC GGTGGTAAGG TCTTTGTTTT GAAGGATTTC
AGGTACGGCA GGTTCTTCCC GGAAAGAGTG GAAGGAAAGA AGGGAAGAAT CGAATTCCTC
AAAAAGGCTC GTGTTTTTGA AACGCTCGAA GATCTCATCG AAGAACTCAA ACCCTTCTCT
TCTGTGGATG TTCTGGATAC GAAAACGAAA GAGAATGCAA AAGCGGTGAT CGCGCAGAAG
AGAGTGCTGG AAGACGGATC TTATCTTCTC TTTCTTGCGA ACACGGACAT CGACCGGGAA
GTGCACTGCC ATCTGGAACT GAAGGAAAAG AGAAAACACA CGTACGCGAT AGACCTGTTC
GATTTCAAAT TGGTGGAGCT GAAGGAAAAC GAGTTTGTCA TGTTCCCAGC GTCGAGTGTT
TGTATCTGGG TAACGGACGA GGAGGTTCCT GCGGAAGATG AGAAAGTGGT TTCAACAGGA
GTTCTTCTGG AGAAAGAATT CGATTTCGAG ACGGCACTGA ACGATTTCGA AGTGAAGATG
AACTCTTTCA ACGTTCTTCC AGTGGACAGG GTGGAGTATT TTGAAGCGGG TGGAAGGGTT
TTCAGGAACG AGTTCGTCTC GAAGATCTGG TACGAGTTCT ACAGGTTACC GGATGGTACA
CCGTTCAGGG TGGAGTACTC TTTCGAGGTC AGGAAAAAGC CTCAAAAACT CTTTCTCGTC
GTTGAGTGCG CGGAAAATCT TGACAGAATC ACGGTGAACG GTCGAGAGGT GAGGTACGAA
AGAAAAAGCT GCATTTTCAA CGAGGAACAG AATTTCCTGG ATGTGAACTT TGGAAAGATG
GAGATCACAG ATCTCGTCAG AGAAGGAAAG AACACGGTTG TTCTGGAGGG AAGAAAAGAA
AACAACATCA CAGGCCCGGG GTGTCACACG AGGGTGAAAG ATCCAGAGAA TCACAGGCCA
ACAGAGGTGG AGACGATATA TCTTGTGGGA GATTTTTCAC TTGTGAACGT GGACGAGACG
AGGTACGTGA TCGATGCACC CAAGGTACCG GATCACAGGG ACATCACACG GGACGGGTAC
CCGTTCTATG TGGGATCCTT CACGCTCAAA AAGATATTTG AGTGTAAAAA AGACCCGGGG
AAAAGATACT TCCTCAAGCT GAACGGTGTG GAGGCGGCCT CGGTCGAGGT GATTCTGAAC
GGGAAGTTCC TGGGCGTTCT TTTCTGGAGA CCTTTCATGA TAGATATTAC AGATGCTCTG
AGAAATGGAA AAAACGAACT CCAACTCGTC CTCACAAACA CACTGTTCAA CCTCATAGAG
GCGAACCACA AGGCAGACGT TCTCGAGGAG ACCTTCAGAA GACCGAAGAG CTTCATAGAT
TTCGAGCACC ACACGGACAG ATACATCCTG CTGCCCTTCG GCCTGGAAAA CGTCGCCGTT
CTCAGCTCTT CTTCACGATG A
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| Protein sequence | MNLEELKNPG VWYRPAPFWS WNDKLCEEEL LRQIDEMYEK GYGGFFMHSR VGLVTEYLSE
EWMRLVRSCA EHARRLGMLA WLYDEDKWPS GFAGGIVPLE KPEHRHKYLT LLKKDQIKPE
DEILKKIERD GEEFYVVKRV MKLGDPWFNG TCYVDLLSRE TTEAFLRSTH ERYKKSCGDL
FRVSIPGIFT DEPTYLRVHH PKETTLPWTE RFPEEFLRRK GYDIRDHLEE LFFNVKDYMK
VRYDFFDVAT SLFIENFTIP YAKWCEENGI FMTGHYMAED TLRGQVEWIG AAMPHYEYMQ
IPGIDKLARH LEQVVTIKQV SSAAEQLGKK WVLCETFGTT GQHVSFLHRK WIADWQAVLG
VTYINPHLSL YSMRGERKRD YPPNLFYQQP WWKNERFLSD YFARLNHIVT QGKREVKVLM
IHPISSAWCV YSKFDDEIDK LNELFDTITK ELVANKIDFH FGDEMILSKH GRVKEAKLRV
GEYEYEVVVL PPLLNLKSST VELLNSLAEN GGKVFVLKDF RYGRFFPERV EGKKGRIEFL
KKARVFETLE DLIEELKPFS SVDVLDTKTK ENAKAVIAQK RVLEDGSYLL FLANTDIDRE
VHCHLELKEK RKHTYAIDLF DFKLVELKEN EFVMFPASSV CIWVTDEEVP AEDEKVVSTG
VLLEKEFDFE TALNDFEVKM NSFNVLPVDR VEYFEAGGRV FRNEFVSKIW YEFYRLPDGT
PFRVEYSFEV RKKPQKLFLV VECAENLDRI TVNGREVRYE RKSCIFNEEQ NFLDVNFGKM
EITDLVREGK NTVVLEGRKE NNITGPGCHT RVKDPENHRP TEVETIYLVG DFSLVNVDET
RYVIDAPKVP DHRDITRDGY PFYVGSFTLK KIFECKKDPG KRYFLKLNGV EAASVEVILN
GKFLGVLFWR PFMIDITDAL RNGKNELQLV LTNTLFNLIE ANHKADVLEE TFRRPKSFID
FEHHTDRYIL LPFGLENVAV LSSSSR
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