| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1643 |
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| Symbol | |
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| ID | 5171509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1638224 |
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| End bp | 1639324 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640564170 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001245225 |
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| Protein GI | 148270765 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAGGA TAACCGTCGT GGAACTGAAG AGGATTTTGA AGAAAAGATC TTCACTGATG
ATGATCATCG CCTCACCCGT TCTGGTTGTG TTGATCTCTC TTCTCTTCAT GCAGGGATAC
AACCTTCAAA CGATGAAGCT CGGAATATAC AACGAAGACA ACAGTATTTG GTCTTCCCTT
GTCATGAGAT TCGTTGGAAC CATCCTGAGG CAGGAAAACA TAGTGAAAGT CGATCAAAAC
TACGAGGAAC TTCTGAAGGA AGGAAAGCTG AACGCGGTCA TAGTGATTCC AAAGGGCTTC
GCGGCAAAAC TGTATTCCAA ACAGCCAACC CAGATGATCT TCATCCCGAG TCCAATCGAT
CTTCACCTCT CCGCTGCGAT ATACAACGTT CTCGATTCCG TTCTGGCAGA TTTCCAGGGG
AGTGCTTTCT TTGATCCCAA GGTGCTCCGG TACATATTCA CGGAGTCCGA TTATCCTGTG
CCCAGATTGA CATTGAAAAA TTCAGAACTC AGGTTTTCCG ATCTCATCTC TCCGTTCGTT
GTCTTTTTCA CGGCGATTTT GATAACCGTA TCACTGGCGA GTGTTTCCAC CTTCCTCGAC
AGAGAGAAGA ACCTGCACGA GATGTTCCTC GTGTACAACC TTCCGGCATG GAAATACGCC
TGTGGAAAGA TTCTTGCCTA CACCTTTATC GGAGCCTCCG TTTCTTTCAT AGCCTACACC
CTGACGGCGA TATTGATTGG AGACAGTCTG GGTTTCTTCG TTACATCTGT ACTCATTCTT
CTCAATGCTC TTCTTCACAC GTCTGTGGGT TTTCTGGTTT CTTCCATTTC TCCCGACAAG
AGTCTTGCAA ACATACTGGG TGTTTCTGTG ATAGGAATAT CCCTGTTCTC AAGCGGGTTC
GCCATTCCAA TAAGCAATTT GCCAGATATC CTTCGAAGAA TCGCTATGTC AACTCCAGTG
TTCAGAACCA TGTACGCCCT CAGGGTGTAT CAACTGGAAC ACACCGTCGA TAATCGCTCG
ATTTTTGTTG TTTTGCTCTG GACAACCGTT TTGTTTTCTA TTTCCGTTCT ATCGGGAAAG
TTCGTTATCA GGAGGGGTTG A
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| Protein sequence | MFRITVVELK RILKKRSSLM MIIASPVLVV LISLLFMQGY NLQTMKLGIY NEDNSIWSSL
VMRFVGTILR QENIVKVDQN YEELLKEGKL NAVIVIPKGF AAKLYSKQPT QMIFIPSPID
LHLSAAIYNV LDSVLADFQG SAFFDPKVLR YIFTESDYPV PRLTLKNSEL RFSDLISPFV
VFFTAILITV SLASVSTFLD REKNLHEMFL VYNLPAWKYA CGKILAYTFI GASVSFIAYT
LTAILIGDSL GFFVTSVLIL LNALLHTSVG FLVSSISPDK SLANILGVSV IGISLFSSGF
AIPISNLPDI LRRIAMSTPV FRTMYALRVY QLEHTVDNRS IFVVLLWTTV LFSISVLSGK
FVIRRG
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