| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1638 |
|---|
| Symbol | |
|---|
| ID | 5171607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 1634327 |
|---|
| End bp | 1635685 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640564165 |
|---|
| Product | putative monovalent cation/H+ antiporter subunit D |
|---|
| Protein accession | YP_001245220 |
|---|
| Protein GI | 148270760 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCTTTC TCGTTTACAA TTTCCTCATC ATATCGCTCG GGATCATCTT TCTTTTCTTA
AAGATGAAAA CTCCCGGGTG GATAGTGTTG GTGAATTTTC TTTTCATAGT CACGATGGTG
ATTTTTGGAT ATCGTTTCGA TCTTGTTTTG ACAGGAAACT TCGGTGTCCA CCTTCTGTTA
GATCAGACAT CATATTTCTT TCTCATCCTC ACGGCCGTTG TTTTTCTAGC AGTCTTCACA
AAGAACATGA GCTACAGCCT CTCGAATCTC ATGCTGATAC TCCTTGGAAC GCTGAACTTA
GCGTTCGTGA GTTACGATCT TTTCAACATA TACGTCACGG TTGAGGTGGT ATCCCTCATC
ACTTTCCTTC TCGTCGTGGA GGGAAAAAAG AAGATTCAGT ACTGGTCCGC CTTCAAGTAT
CTGATATTGG GTACCGTGGG TATGAATTTG TACCTGATAG GAATCGGTGT TTTATACGCG
GAAAACGGTA CACTCTCGAT CTCAGACATT TCAAAGGTGA ACTCATTTGC CTCCACTCTC
GTCGCGACCG GTCTTCTCCT GAGAGCTGGT GTGTTTCTTT TCAGTATGTG GCTCCCTCAG
GTTCATTCAG AGGCAGAAAC ACCCGTTTCA GCGGTTCTAT CCGGTGTTGT TGTGAAGAGT
GCTGTATACG CACTTGTTCG GTTGGAACAC GTGGTGAACT GGGATGTGGT GAAGATCTTT
GCCATCTTTT CGGCGCTCTC GGGTGTTCTG TTCGCCTTTC TTTCGAAGGA TTACAAGAGA
ATTCTTGCCT ACAGTACTCT TTCACAGATA GGGATAGTCC TCGTGTCACC GGCCACAGCT
CCAGTTTACG CTCTCTCACA TGGAATTTCC AAAGCCTGGC TTTTTCTTCT GAAAGATGAT
CTCCCGGAAA GAGATGTAAC TAAGTGGAAA AAACTCGATT TCTGGACGTG GCTGTCTCTT
TCGATGGCAA GTCTTTCGAT CATGGGACTT CCAGGCCTTG CGGGTTTTTC GAAGAATCTG
GTTCTCGAAC AGCTTCATGG ATGGGAGAAG ATGCTGATGA AACTCGCCTT TGTTGGAACC
GCCGCTTCCT TCTGGAAGTT CCTCTTGAAG CCTTTCGAAT TCAAAAAGAA ACTACCAGGG
ATGTATAATC CTGTTCTATT CGCCACTTCT CTGACGATAG GACTTTATTT TGCTAGCTGG
GGAAAAGCTC TTGAAAGCTT CTTCTTAACA GGTGCGGGAC TCCTGGTTTA CTTTCTCTTC
AAGAACGTGA GGATAGAAAA GTATCCGCTT GAAGACTTCG AGTCCATGCT CGGGGTCTAT
CTTTTGGGGG TGGTGGCTTG TCTTCTCTTG TCGCTGTGA
|
|---|
| Protein sequence | MIFLVYNFLI ISLGIIFLFL KMKTPGWIVL VNFLFIVTMV IFGYRFDLVL TGNFGVHLLL
DQTSYFFLIL TAVVFLAVFT KNMSYSLSNL MLILLGTLNL AFVSYDLFNI YVTVEVVSLI
TFLLVVEGKK KIQYWSAFKY LILGTVGMNL YLIGIGVLYA ENGTLSISDI SKVNSFASTL
VATGLLLRAG VFLFSMWLPQ VHSEAETPVS AVLSGVVVKS AVYALVRLEH VVNWDVVKIF
AIFSALSGVL FAFLSKDYKR ILAYSTLSQI GIVLVSPATA PVYALSHGIS KAWLFLLKDD
LPERDVTKWK KLDFWTWLSL SMASLSIMGL PGLAGFSKNL VLEQLHGWEK MLMKLAFVGT
AASFWKFLLK PFEFKKKLPG MYNPVLFATS LTIGLYFASW GKALESFFLT GAGLLVYFLF
KNVRIEKYPL EDFESMLGVY LLGVVACLLL SL
|
|---|
| |