| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1623 |
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| Symbol | |
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| ID | 5170499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1621658 |
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| End bp | 1623481 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640564149 |
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| Product | flagellar hook-associated 2 domain-containing protein |
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| Protein accession | YP_001245205 |
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| Protein GI | 148270745 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTGA GCAAAATAGC CAGCACCATA AACATGAGAT ATTACTCACA GCTGGGTGGT
TTTCAGGTGG GAGGAGCTGT CAGTGGACTC GACACCCAGT CCATCATAAA CGCCATTCTC
GAGGCGGAGA GCCAGCCGCT TCAGAATCTC ACAGAAAAGT ACGAAAAGTA CGAGCTCATG
CAAAAAGCCT ACGAAGAGGT GAAGACAAAG CTCAGAGAAT TCAGAGATCT GGTCTACAGC
TTCAAACTCC AGAGTACTGT TGTCCAGAAA ACAGCCGTTT CTTCCAGCTC TCTTCTTTCG
GCTGAGGCTT CTTCCGTGGC CGTCACAGGT GTATACCACG TAAAGATCGT TCGAACCGCG
ACTTACACTA CACTGACTGG AGCGAATGAA GTTGTTCCGT CTCCCGATTC AACGAAGACG
TTTGGAGAAC TCAATTACAT GTACACACCT CAGGAAGGAA CCGTGAGACT GTACAACAAC
GATACAGGAA ACTACGTGGA CGTTCAGGTT CTCTCCACAG ATACCATAGA CGACATCGTC
AACAAGCTGA ACAGCGCTCT TTCTTCTGCT GGAATAACAG GAAGCGCCAG CTACGACACT
AGCACCGGAA AGCTCAGCAT CACTTCCGAC AAGAACTTCT CGCTCGTCGA TATCACAGGA
AACTTCACGA AGGTGTTTCA TCTGGATGAA GCCAGTCTGA ACTACAGCAG TGGAAATTAC
TCTCTCACCA GCACGGCTTC CGTTAGCGGC CTTTCTACGG TGAAAACGCT CCTGCAGATT
GCCACATACA CTTCAAAGAC CATAATAAGT GGAAAGGTGA AGATAAACGG TGTGGAGATA
GAATTTGATC AGAACGAAAC GTTGTCTTCC CTTATAAAAA AGATAAACGA CAGCGAAGCC
GGGGTTACCG CCAGCTATGA TTACCACGCG AACAGAGTTG TGATCACTTC GAAAACTTCC
GGCCCTGAAG CCATCACTCT GGAAGACACG GACGGAACCG GTTTGTTCTC GCTTCTTGGA
ATAGAAAATC ACAGTCTCTT CGTGGGTCAA AAAGCTCATC TTCAGATCAG TATGGATGGT
ACAAACTGGG TGGACGTGTA TTCAGACACG AACGACGTGG AGTACAACGG TGTCACTTTC
CATATCTCTG GAGTGACATC CGAAACGATC ACCGTTGATG TGAAAATCGA CACAGATGCG
ATAGTTGAGA AGATAAAAGG ATTCGTAGAT AAATGGAACG AAACGATGGA TTATCTGAAC
GAAAAGCTTA CAGAAGAACC GGTAACTGAC AAATCCGAAG AAGAGATGAC AGAAGAGGAA
AAAATGAAAG GAGTTCTGAA AGGAGACGAT CTGTTAGAAG AGATCTTCTC CCGTCTCAGG
GGGTTCATCA CGTATAAAGC CGAAGGAGAC ATAAACTACC TCTGGGAACT CGGGATCAGC
ACAGGGGACA TAGGAACCGG ATACGAGAAC ATGATGAAGG GCCATCTCGA AGTGGATGAG
GAGAAACTGA AACAGATAGT GGAAGAAGAT CTGAACAAGG TATGGGAGTT CTTCGGTGGA
GCGAACGGTT TCGCTACACA GCTCGACGAT TATTTATGGG AACAGGTGAA GTTCAACGGA
AGAATTGATC AGTTTGCTGG AATCAGTGGT CGAATAGAGA GAGAACAGAG GTTCCTTGCC
ACACAGATAG CGAGTTGGAT CGAAAGGCTC TCCAAGAGAG AACAGGAACT CTGGAGGAAG
TTTTCAGCCA TGGAGGAAGT GATCTCCCGG CTTCAAGCTC AGGGAAGCTG GATATCTCAG
GCTCTGCAGG GTAATAACAA GTGA
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| Protein sequence | MDLSKIASTI NMRYYSQLGG FQVGGAVSGL DTQSIINAIL EAESQPLQNL TEKYEKYELM
QKAYEEVKTK LREFRDLVYS FKLQSTVVQK TAVSSSSLLS AEASSVAVTG VYHVKIVRTA
TYTTLTGANE VVPSPDSTKT FGELNYMYTP QEGTVRLYNN DTGNYVDVQV LSTDTIDDIV
NKLNSALSSA GITGSASYDT STGKLSITSD KNFSLVDITG NFTKVFHLDE ASLNYSSGNY
SLTSTASVSG LSTVKTLLQI ATYTSKTIIS GKVKINGVEI EFDQNETLSS LIKKINDSEA
GVTASYDYHA NRVVITSKTS GPEAITLEDT DGTGLFSLLG IENHSLFVGQ KAHLQISMDG
TNWVDVYSDT NDVEYNGVTF HISGVTSETI TVDVKIDTDA IVEKIKGFVD KWNETMDYLN
EKLTEEPVTD KSEEEMTEEE KMKGVLKGDD LLEEIFSRLR GFITYKAEGD INYLWELGIS
TGDIGTGYEN MMKGHLEVDE EKLKQIVEED LNKVWEFFGG ANGFATQLDD YLWEQVKFNG
RIDQFAGISG RIEREQRFLA TQIASWIERL SKREQELWRK FSAMEEVISR LQAQGSWISQ
ALQGNNK
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