Gene Tpet_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1608 
Symbol 
ID5171412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp1608284 
End bp1609354 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content49% 
IMG OID640564134 
Productinner-membrane translocator 
Protein accessionYP_001245190 
Protein GI148270730 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0142848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAGA AACTATCTGC ACGAACGAAC TTCATTCTCA CGGTTGTTTT TCTGATCTTC 
ATGGCCCTTC TTCTCTATCT GGCCGATAGA TACATGGACA GCTACAAGCT GAGGGTAGTG 
AGGCTCATCG CCATCTACGG TATCATGGCG GTGAGTTTGA ACCTGATAAA CGGTATCACG 
GGTATCTTTT CTCTTGGACA CGCCGGTTTC ATATTGATAG GTGCTTACAC GGCGTCTCTT 
CTTACGCTTT CACCCGAACA AAAAGCGATG TCTTTCATAA TAGAGCCGAT TGTTCCCTGG 
CTTGCGAACG TACACACCGA CTTTTTCACC GCCACAGTGG CAGGTGGTGT ACTGGCAGCC 
GTCTTCGCTT TTCTCATAGG ATGGCCGGTT TTGAGGCTTT CTGGTGATTA CCTCGCGATA 
GCATCCCTTG GTTTCGCAGA AGTGATAAGG ATCATCGCTC TCAACGCCAT CAGAATCACA 
AACGGGCCTC TTGGTCTCAA GGGAATTCCG GAATACTCGA ACATCTGGTG GTGCTACGGC 
TGGCTGTTTG TAACGGTTCT GTTCATAGCA AGCCTTGTGA ACAGTAGTTA CGGAAGGGCA 
CTGAAGGCTA TCAGAGAAGA CCGCATAGCA GCGGAAGCCA TGGGAATAAA TGTTTTCAAA 
CATCAGCTTC TCTCCTTTGT CATAGGAGCG TTCTTCGCGG GTGTTTCTGG TTCACTTTAC 
GCACACTGGC TCACCACGAT AGATCCCAGA ACGACCACAC TCGGTCCCAT GCTCACCTTC 
TACGTTCTCA TTATGATAGT TCTGGGTGGG CTCGGCAGCA TTTCGGGTTC GCTCATAGGA 
GCTGCTCTCT TCGCCATACT CTTCGAGTGG CTCAGGGATC TGGAAGAGCC CTTCACGTTC 
TTTGGTATAC ACGTTCCCGG TATAAAGGGA ATGAGGATCC TCGTGATATC CGCTATCTTC 
ATCCTTGTGA TGATCTTCTG GCAGAGGGGT ATCATGGGAA GGGAAGAACT CACCTGGAAC 
AACATTTACA GATGGCTCTT TGCTCGTCGC AAGGGTGGTG AAAAGAAATG A
 
Protein sequence
MEKKLSARTN FILTVVFLIF MALLLYLADR YMDSYKLRVV RLIAIYGIMA VSLNLINGIT 
GIFSLGHAGF ILIGAYTASL LTLSPEQKAM SFIIEPIVPW LANVHTDFFT ATVAGGVLAA 
VFAFLIGWPV LRLSGDYLAI ASLGFAEVIR IIALNAIRIT NGPLGLKGIP EYSNIWWCYG 
WLFVTVLFIA SLVNSSYGRA LKAIREDRIA AEAMGINVFK HQLLSFVIGA FFAGVSGSLY 
AHWLTTIDPR TTTLGPMLTF YVLIMIVLGG LGSISGSLIG AALFAILFEW LRDLEEPFTF 
FGIHVPGIKG MRILVISAIF ILVMIFWQRG IMGREELTWN NIYRWLFARR KGGEKK