| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1469 |
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| Symbol | |
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| ID | 5170231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1459193 |
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| End bp | 1460800 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640563998 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001245056 |
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| Protein GI | 148270596 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAGTC ATCAACTTTT GAAAGCACCA TTTCAGCATG GATTTCTCTT CTCACGACCA
CTTGTTATGT ACTGCTTCAA AACATGCCAT GATTCAGCCT GGAAACATTA CATAAGATTT
CTGAAATACC GTCATGAAAA GCTTTACGAG GAAGCTCTTT CAGAGATAGA TAACGCAATA
AAGGTTTGCA ACTCGATCGC CTTTCGCTAC TTTCTTCTTT CAGAAAAACT CACCGTGCTC
GGTTATATGG GAAAACACGA GGAAGGAATA AAACTTTACT CTCATTTACG CGGTAGAATG
AGAAACGTTT CACCGAATCT CAGGAGCATA TTTATTGGAA ACCTTCTGAA CTATTGCTCC
ATGTATCTAC ACAACGCTTT TGAATGTTTA GGGAGAATAA AGCCAGAGGC TCATCATCTG
GAGAAATCCT CTTATGCTTT TATACTGATA GGAAAAGCAA GATATATGGC AAGAACAGGA
AACGTCAAAG AAGCGATGGA GTTCTACGAA AAAGCACTGA AAATACTGCA AGAAATTCCT
CATCCTTCTG GAATAATCGC CTGTCTTAAC GATATGGCAT GGTATAAAAA GGAGAAAGAT
CCAGAAAAAG CCAAAGATAT GGCAGAAGAA GCACTCTACT GGAATGGATA CTTTTTTGAT
ACTCCGCGGT TCTATGCACT GGACACACTG TTTGAGATTC AAAGGACAAC TTCTGACCCC
GCAATCGTTG AAACTGCCAG GCTGATTGTG ATCGCTTCTG AAGGGTTAAA AGACAACGCA
AACGATCTCT TGAAAAATGC CCAGAAACTG TGTTTGAGAT TGAACAACTC TCTCTACAAA
AACACAAAAT CTCTCCAGAG ATTTCTGAAG AAAAACACCA CATCCATCAA ACACCTCTCA
GAAATGACAG GAGTTGCAAG AAACAGACTG ATCGACATAT TAAACGGAAA AACACAAAAG
ATCAGGGGAG AAACGCTAAG AAAAATAGCA AAGGCTCTTG GAAAGTCCAA CATTTTGTCT
CTTCCTGAAC CCCTGTTAAA TGAACTGGTG AAACTGAAGA TAGAAGAGGA TTTCTCGGCT
TCATTGAGAG AAATAAAGAC AAAAATTTTA GAGGAAAGAC AAATCCTTTT TCTTACCACC
TACATGGCTC TTCTTGATAG AGAGTTCCTT TCAAGGAAAG AAAAGCTCAA AAAGGCATAT
ACACTCCTTG AAGATATTGA GTCGTTCGCT GATTTCATGG CAAAAGATCA CCGGACCATG
GAATTTGTTG TTTCAATGGT GAAGGCTCAT CCTTTCATTG AAGGAAGAAA AGAAGCGGTG
AAGAAGGCCC TTGAAAGGAT GAAAAGAAGG AAACTGGAAA GATTCACTTT GAAATACATC
GAGATGAAAG AATCTGACAG AAGGCTTTTG GATAAATTTC TAAGAAACTA CGGAAGGTAC
GATGGTGTGA GGTTTGGCAT CAGGTTAAAA GGTCCAGAAG TAGTGAGAGA ATTTGCAAAA
AAGTACTCTC TCAAGGTTCA GCCCCTGTTT GTTGCTTTCT GGTGCGAAGA GGACGGCAGA
GCAAGAAGAA GACTGGAAAG AGTCTTGAAG CATATGGTCC TGAATTGA
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| Protein sequence | MKSHQLLKAP FQHGFLFSRP LVMYCFKTCH DSAWKHYIRF LKYRHEKLYE EALSEIDNAI
KVCNSIAFRY FLLSEKLTVL GYMGKHEEGI KLYSHLRGRM RNVSPNLRSI FIGNLLNYCS
MYLHNAFECL GRIKPEAHHL EKSSYAFILI GKARYMARTG NVKEAMEFYE KALKILQEIP
HPSGIIACLN DMAWYKKEKD PEKAKDMAEE ALYWNGYFFD TPRFYALDTL FEIQRTTSDP
AIVETARLIV IASEGLKDNA NDLLKNAQKL CLRLNNSLYK NTKSLQRFLK KNTTSIKHLS
EMTGVARNRL IDILNGKTQK IRGETLRKIA KALGKSNILS LPEPLLNELV KLKIEEDFSA
SLREIKTKIL EERQILFLTT YMALLDREFL SRKEKLKKAY TLLEDIESFA DFMAKDHRTM
EFVVSMVKAH PFIEGRKEAV KKALERMKRR KLERFTLKYI EMKESDRRLL DKFLRNYGRY
DGVRFGIRLK GPEVVREFAK KYSLKVQPLF VAFWCEEDGR ARRRLERVLK HMVLN
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