| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1461 |
|---|
| Symbol | |
|---|
| ID | 5171384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 1450674 |
|---|
| End bp | 1451192 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640563992 |
|---|
| Product | Fe-S oxidoreductase-like protein |
|---|
| Protein accession | YP_001245050 |
|---|
| Protein GI | 148270590 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTTTTC AAATCGATCT ACATAGTATT TATCCAGAAT ATTATGAATG GTTCACAGGT
AATAGATATG CTTATGAGAA AGCCGTGGAC ACTATCTCAA AAGTAACAGA TACCGGTGTA
CCTGTCAGAA TTGCTTGCAA TGTGACTCCA AAAAATGTGG ATCATATGTT CGAAATAGCA
GAAACTGCCC ATAAGCTTGG AGCTACATCA ATTGCATTCG GACCGATTGC TCCATTGGGA
AGAGCAAAAG TCAATAAGAA CTTGATTCTG AGTATGGATT CTTTTAAAAA ATTCGTTTCC
AATATGAATA AGCTTATCAA CGTATATGGA AAAGATTTCA TAACCACTCT TGAATCAAGG
CCAAATGCTA TTAACTGCGG AGCAGGCTGG AACAGCTTGA CGATTTCTCC AAACTTTGAT
GTGAAAATTT GTCAAATGGC AAGTGTATAT ATTGAAAATC TTAGAAGATA TGGATACTCG
TACAGAAATT TTCTAATTGA AAATTCAGAT CTTTTGTAG
|
|---|
| Protein sequence | MAFQIDLHSI YPEYYEWFTG NRYAYEKAVD TISKVTDTGV PVRIACNVTP KNVDHMFEIA
ETAHKLGATS IAFGPIAPLG RAKVNKNLIL SMDSFKKFVS NMNKLINVYG KDFITTLESR
PNAINCGAGW NSLTISPNFD VKICQMASVY IENLRRYGYS YRNFLIENSD LL
|
|---|
| |