| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1421 |
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| Symbol | |
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| ID | 5171463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1409196 |
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| End bp | 1410278 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640563950 |
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| Product | twitching motility protein |
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| Protein accession | YP_001245010 |
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| Protein GI | 148270550 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAGACA TGAAAGTTTC TTTTCTGAAG ATCATCACAG AAGCGTACGG TTTGAGGGCA
ACCGATGTGC ACATCTCGGT GGGTTGCCCT CCTTATTACC GTATAGATGG GGACCTTGTA
CCTCAGGAAA AGTACGGAAA ACTCACAAAA GAATCTATAA TGAACGCTCT GAAAGATCTG
TTCACTGAGA TCGGACAGCC GTTCCCACCT AAAACGAAAG AAGTGGATTT TTCCTTTACC
GTGGCAGAAG CGATAAGGGT GAGGGGAAAC CTCTATTACG AGAGAAAAAA CCCCGCTCTC
GCTTTCAGGT TGATACCAAA AAAGATCAGA ACTTTTCAGG AACTGGGACT ACCAGAGATC
TTGAAAACAT TCGTTGAGAG AAAGTACGGC TTGATATTGG TGGCTGGTCC CACAGGAAGC
GGAAAATCCA CCACACTCGC CGCCATGATA GATCACATCA ACGAAAATTT CCCACACCAC
ATAATAACGA TAGAAGACCC GATAGAATAC GTTTTCACAA ACAAAAAATC TGTGATTCAC
CAGAGAGAAC TCGGTTCAGA CACGGACTCT TTCTACAACG GATTGAAGTA CGCTCTGAGG
CAGGACCCGG ATGTGATCCT CGTGGGAGAA ATGAGAGACC TTGAGACAAT GGCTCTCGCT
CTCACCGCGG CGGAAACGGG ACACCTCGTT CTTGCCACGG TTCACACGAA CTCCGCGGCT
TCCGCACCTG AGAGAATCAT AGATGTTTTT CCAGCACATC AGCAAAGACA GATCGCTCTT
CAGCTCGCGA ACACCTTGAT CGCCGTGATT TATCAGAGGC TTGTACCGAA AGCCAACGGA
ATAGGTTTCA CTCCGATCCT GGAGATCATG GTGGGAACTC CGGCCGTGAG GAACCTGATA
AGAGAAAACA AACTCCACCA GCTCGAATCT CTGATACAGG CTGGTGCGAG ACACGGAATG
GTCCTCTTCG ATGACGCACT CGTGAAAGCC GCACTCAAAG GAGAGATATC CAGAGAATCC
GCTCTGCAGT TTGCCAGGAA CCAGGAGGAG GTGGCTCGAA GATTAGGAAT GAAGCCCTCG
TAG
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| Protein sequence | MEDMKVSFLK IITEAYGLRA TDVHISVGCP PYYRIDGDLV PQEKYGKLTK ESIMNALKDL
FTEIGQPFPP KTKEVDFSFT VAEAIRVRGN LYYERKNPAL AFRLIPKKIR TFQELGLPEI
LKTFVERKYG LILVAGPTGS GKSTTLAAMI DHINENFPHH IITIEDPIEY VFTNKKSVIH
QRELGSDTDS FYNGLKYALR QDPDVILVGE MRDLETMALA LTAAETGHLV LATVHTNSAA
SAPERIIDVF PAHQQRQIAL QLANTLIAVI YQRLVPKANG IGFTPILEIM VGTPAVRNLI
RENKLHQLES LIQAGARHGM VLFDDALVKA ALKGEISRES ALQFARNQEE VARRLGMKPS
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