| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1321 |
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| Symbol | rplQ |
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| ID | 5169980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1317020 |
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| End bp | 1317415 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563846 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_001244911 |
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| Protein GI | 148270451 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000123779 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGACATA GAGTGAAGAG GCACAGACTT GGAAGATATG GTAGCCACAG AAAAAGTCTC
TTGAGAAACC TTTCAAGAGA AATCGTTGAA CACGGTTCGA TAGTTACCAC AACAGCAAAA
GCAAAAGCTC TGAAGATATT AATGGATAAA CTTGTCAGCA AGGCCATAGA AGCCGCCACA
ACTGATGATA AAGCCAAAAG CGTTCATCTG AGGAGGCAGA TAAACGCTGT GCTTGGAGAC
AGACGATTGA CAAACAAACT TGTGGATGAA ATAGCGAAGA ACTACGTTGG GAGACACGGA
GGCTATGTGA GGGTTCTGAG GATAGGTTTC AGAAGAGGAG ATGCCGCTGA GATGTCGCTC
GTTCAGCTTG TGGAGGCATC CAGTCAGGAA GGCTGA
|
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| Protein sequence | MRHRVKRHRL GRYGSHRKSL LRNLSREIVE HGSIVTTTAK AKALKILMDK LVSKAIEAAT
TDDKAKSVHL RRQINAVLGD RRLTNKLVDE IAKNYVGRHG GYVRVLRIGF RRGDAAEMSL
VQLVEASSQE G
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