Gene Tpet_1283 details

Gene Information

• Locus tag: Tpet_1283
• ID: 5171425
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: -
• Start bp: 1294685
• End bp: 1295137
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640563808
• Product: hypothetical protein
• Protein accession: YP_001244873
• Protein GI: 148270413
• COG category: [R] General function prediction only
• COG ID: [COG0319] Predicted metal-dependent hydrolase
• TIGRFAM ID: [TIGR00043] metalloprotein, YbeY/UPF0054 family

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00032786
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAGAA TACTGGGTGA GGGTAAAGGA TCGAACCTTC TCGAAGACGT TAAAGAAAAA 
CTCGAAGAAA TCGTAAAGAA AGAGATAGGA GATGTACATG TAAACGTGAT TCTTGTGAGC 
GAAGATGAAA TTAAAGAACT CAACCAGCAG TTTCGAAGCC ACGATCAGCC AACAGATGTG 
CTCACCTTTC TCCTCATGGA AGAAGATGTC TATGGAGAAA TCTACGTTTG TCCCATGATC 
GTAGAAGAAA ACGCCAAAGA GTTCAGCAAC ACCTTTGAAA AAGAGCTTCT GGAAGTGGTG 
ATTCACGGGA TACTTCATCT TGCAGGATAC GATCACGAGT TTGAAGACAG AAAATCCAAA 
GAGATGTTCG AAAAACAGAA AAAATATGTC GAGGAGGTAT GGGGTGAATG GAGATCAGAC 
CCTTCAGAGG ATTCAGGCCC AGGAAAGAGA TAG 

 

Protein sequence

MIRILGEGKG SNLLEDVKEK LEEIVKKEIG DVHVNVILVS EDEIKELNQQ FRSHDQPTDV 
LTFLLMEEDV YGEIYVCPMI VEENAKEFSN TFEKELLEVV IHGILHLAGY DHEFEDRKSK 
EMFEKQKKYV EEVWGEWRSD PSEDSGPGKR