| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1268 |
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| Symbol | |
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| ID | 5170836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1280077 |
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| End bp | 1281063 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640563793 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001244858 |
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| Protein GI | 148270398 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000451376 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACGC TCCTCCCTGT AGTCGTGGTC CACGATATTG AGCCAGTTTC AATGCGTCTT
CAGAGGTACA AGAACAAAAA TTCGATAAAA AGAGAAAAGC AGGGATTAAT ACCCCTGTTT
TTTTATTTTT GGGTGTATTT AGTTCTATTT GCGAATTTTC AGATTTTGAA TGTAAACATT
TTCATAATAA GATGTTTTCT GGAGGTGATA ATGGTGGTAC TGATGACAAA ACCGGGAACA
TCGGATTTTG TATGGAATGG CATTCCCCTT TCCATGGAGC TGAATCTGTG GAACATAAAG
GAATACTCCG GTTCTGTAGC TATGAAATTC GACGGTGAAA AGGTAACTTT CGACGCGGAC
ATTCAGAATC TTTCTCCAAA AGAACCAGAA AGGTACGTTC TCGGTTATCC CGAGTTCTAT
TACGGTTATA AACCCTGGGA AAAGCACACG GCAGAAGGTT CGAAACTTCC AGTACCTGTT
TCCTCTATGA AATCATTTTC CGTCGAAGTT TCTTTCGATA TTCACCACGA ACCGTCTCTG
CCTTTGAACT TTGCCATGGA AACATGGCTC ACAAGAGAAA AGTACCAGAC GGAAGCGTCG
ATCGGCGATG TTGAAATCAT GGTCTGGTTC TATTTCAACA ATCTCACACC AGGGGGCAAA
AAGATAGAGG AGTTTACGAT TCCGTTCGTG CTGAACGGAG AGAGTGTCGA AGGCACCTGG
GAACTGTGGC ACGCGGAGTG GGGATGGGAC TACCTCGCTT TCCGCTTGAA GGATCCCGTG
AAGAAGGGAA GGGTGAAGTT CGACGTGAGG CATTTTCTTG ATGCCGCCGG GAAAGCTCTT
TCGAATTCCA CTCGTGTGAA AGATTTTGAA AATCTTTACT TCACCGTCTG GGAAATTGGA
ACCGAGTTTG GAAGCCCGGA AACAAAGAGC GCGCAATTCG GGTGGAAGTT TGAAAACTTC
TCTATTGATC TGGAGGTGAG AGAATGA
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| Protein sequence | METLLPVVVV HDIEPVSMRL QRYKNKNSIK REKQGLIPLF FYFWVYLVLF ANFQILNVNI
FIIRCFLEVI MVVLMTKPGT SDFVWNGIPL SMELNLWNIK EYSGSVAMKF DGEKVTFDAD
IQNLSPKEPE RYVLGYPEFY YGYKPWEKHT AEGSKLPVPV SSMKSFSVEV SFDIHHEPSL
PLNFAMETWL TREKYQTEAS IGDVEIMVWF YFNNLTPGGK KIEEFTIPFV LNGESVEGTW
ELWHAEWGWD YLAFRLKDPV KKGRVKFDVR HFLDAAGKAL SNSTRVKDFE NLYFTVWEIG
TEFGSPETKS AQFGWKFENF SIDLEVRE
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