| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1257 |
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| Symbol | |
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| ID | 5170827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1271979 |
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| End bp | 1272875 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640563782 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001244847 |
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| Protein GI | 148270387 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA GGCTGAACCA AAACTCCTGT GAACTGGAAA AAGTCAAAGA ACGCATCGAA
CAGATTCTTT CCCGATTCTT CCCCGAACAG ATAATGAAGG ATCTTCCGCT CTACGGAAAG
ATGTTGAGGG TGAGACTTTC GATACTTTCT TTCAAAAATA GAGGAGTAGA GATCAGTGAA
GATGCGATAT CTTCTCTTGC GGCGCTCGAA CTCGTTCACC TTGCCTCACT TCTCCACGAC
GATGTGATCG ATGGGGCTCG TTTTAGAAGA GGAAAAGAGA CGATAAATTT CATGTACGGT
GACAAAGCGG CGGTAGCAGC GGGGGATCTT GTACTTGTCA GTGCGTTCTA TACGGTTGAA
GAGATAGGAA ATGACAGACT GAGAAGGACT TTTTTGAATG TGATCAGGAG AATGTCGGAA
GCGGAGCTGA TCGAACAGCT GAGTCGATAC AAACCGATTA CAAAAGAAGA ATATCTTCTC
ATAGTTGAGG GAAAGAGCGG TGCGCTTTTC GGCCTGGCGC TGCAGCTTCC CGCATTATTC
GAAGGGGAAC TCGGAGAAGA TCTTTACAAT CTGGGGGTCA CCATTGGAAC CATTTATCAG
ATGTTTGATG ACATCATGGA TTTTGCTGGA ATGGAAAAGA TTGGAAAAGA CGGATTTCTC
GATCTCAAAA ACGGCGTTGC TTCTTTTCCA TTGGTGACGG CGATGGAGAA GTTTCCAGAA
GCCAGACAGA TGTTTGAAAA CCGGGATTGG AATGGATTGA TGTCGTTTAT GAGAGAAAAA
GGGATTCTGA AAGAATGTGA AGAGACTTTG AAGGTTCTTG TGAAGAATGT GATGATAGAG
AATTCATGGT TGAGAGATTT TGTGGAAGGA ATTTTTAAAA TCAAAATCTT TTCATGA
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| Protein sequence | MKNRLNQNSC ELEKVKERIE QILSRFFPEQ IMKDLPLYGK MLRVRLSILS FKNRGVEISE
DAISSLAALE LVHLASLLHD DVIDGARFRR GKETINFMYG DKAAVAAGDL VLVSAFYTVE
EIGNDRLRRT FLNVIRRMSE AELIEQLSRY KPITKEEYLL IVEGKSGALF GLALQLPALF
EGELGEDLYN LGVTIGTIYQ MFDDIMDFAG MEKIGKDGFL DLKNGVASFP LVTAMEKFPE
ARQMFENRDW NGLMSFMREK GILKECEETL KVLVKNVMIE NSWLRDFVEG IFKIKIFS
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