Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1231 |
Symbol | tgt |
ID | 5170870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1248484 |
End bp | 1249593 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640563755 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_001244821 |
Protein GI | 148270361 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.579512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGTTCG AAGTGAAAAA AACTTTCGGA AAAGCAAGAC TGGGTGTCAT GAAGCTTCAC CACGGAGCTG TTGAAACTCC TGTTTTCATG CCGGTTGGAA CCAACGCGAG CGTGAAGCTT CTCACTCCCA GAGATCTGGA AGAAGCAGGA GCGGAGATAA TTCTTTCGAA CACGTTTCAT CTCATGTTGA AACCCGGTGT GGAGATCATA AAGCTTCACA GGGGACTTCA CAACTTCATG GGATGGAAAA GACCGATACT CACCGACAGC GGAGGTTTTC AAGTTTTCAG CCTTCCAAAG ATCAGGATAG ACGATGAAGG TGTGGTCTTC AGATCTCCTA TTGACGGTTC GAAAGTTTTC CTGAATCCAG AGATATCCAT GGAGGTTCAG ATCGCTCTGG GATCGGATAT CTGCATGGTC TTCGATCACT GTCCTGTACC CGATGCCGAT TACGAAGAGG TGAAAGAGGC AACAGAGAGA ACCTATCGAT GGGCTCTGAG ATCTAAAAAG GCTTTCAAAA CGGAGAATCA AGCACTCTTT GGAATCGTTC AGGGAGGGAT CTACCCGGAT CTGCGGAGAG AAAGCGCTCT TCAGCTTACA TCGATTGGAT TCGATGGATA CGCCATAGGA GGATTGAGCA TAGGTGAAGA AAGATCCCTC ACTCTTGAAA TGACCGAAGT CACGGTGGAG TTTCTTCCGG AAGATAAACC CCGTTACTTC ATGGGAGGAG GGTCTCCAGA ACTCATACTC GAGCTCGTTG ATCGAGGAGT GGATATGTTC GACAGCGTCT TCCCAACCAG GATAGCAAGG CACGGAACTG CGCTCACCTG GAATGGGAAA CTCAACCTCA AGGCCTCTTA CAACAAGCGG TCCCTCGAAC CGGTGGACGA AAGGTGCGGG TGTTATACCT GCAAGAATTT CACGCGGTCT TACATCCATC ACCTCTTCGA TCGAGGAGAA GTCCTTGGGC AGATACTCCT CACGATTCAC AACATCAACT TCATGATCTC TTTGATGAAG GAAGTAAGGC GTTCTATAGA GAGTGGAACC TTCAAGGAAC TGAAAAGCAA AGTGGTAGAA GTCTATTCTT CAGGGGGTGT GAATGTATGA
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Protein sequence | MEFEVKKTFG KARLGVMKLH HGAVETPVFM PVGTNASVKL LTPRDLEEAG AEIILSNTFH LMLKPGVEII KLHRGLHNFM GWKRPILTDS GGFQVFSLPK IRIDDEGVVF RSPIDGSKVF LNPEISMEVQ IALGSDICMV FDHCPVPDAD YEEVKEATER TYRWALRSKK AFKTENQALF GIVQGGIYPD LRRESALQLT SIGFDGYAIG GLSIGEERSL TLEMTEVTVE FLPEDKPRYF MGGGSPELIL ELVDRGVDMF DSVFPTRIAR HGTALTWNGK LNLKASYNKR SLEPVDERCG CYTCKNFTRS YIHHLFDRGE VLGQILLTIH NINFMISLMK EVRRSIESGT FKELKSKVVE VYSSGGVNV
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