| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1229 |
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| Symbol | |
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| ID | 5170144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1246876 |
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| End bp | 1247682 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563753 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001244819 |
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| Protein GI | 148270359 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00337735 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCTCACCA GACTGATCCT AACGGCGGTA ACGGTTGTTG TTTCTTATCT GGTTTTCAAA
TGGCTGTTCA AGCTCATTGA AAAGAGTGTG GAAAAGCTCG GAAAAGAGCT TCAAATGAGA
AACACCCTCA GATTTTTCCT GGGATTGATC ATCTCTGTGA TCGCGGTGAT GATAATTCTC
GACATCTGGG ATTTAAGTCT TGCACCACTT CTCGCTGGAG TGGGTATCGG AGGTCTTGTC
ATAGGTCTTG CTCTTCAGGA ACCGCTGGCC AATTTCTTCT CAGGGTTGTT CCTTCTAGTG
TCTCGGGCTG TCAAGGAAGG AGAGGCTCTG GAGGCCGGTG GAGTCTCCGG AACCGTTGAA
GTGGTGAATT TGAATCATAC CGTGATCAGG ACCTGGGATG GTCGAAGAGT GATGATACCG
AACAAAGCCG TCTGGAACGA CAAGATAATA CATTTCTGGC CTTCGAACGT TAGAAGACAG
GAAATTGTGG TGGGAGTTCC TTACTCGGCT GATTTGAGGA AAGTGGTGGA GATCTTCCAG
AAGGCGCTGG AAGACGAAGA GACTGTTGAA AAAGATCCAG CACCAGCTAT CGTTTTCTCT
GCCTTCAACA GCTCTTCCAT AGACTTCATT ATCAGATTCT GGGTCAACCG TGATAACTTC
TTCGAAGGTA TGAAGAGATT GGCTTTCAGA ATAAAGGATT ATCTGGAAAA AGAGGGAATC
TACATACCTT TCCCACAACT CGATGTGCAT TTTGACGAAG AATTCATAAG GGCGTGGAAG
CATGAAGGCT CTGAAAATAA GAGTTGA
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| Protein sequence | MLTRLILTAV TVVVSYLVFK WLFKLIEKSV EKLGKELQMR NTLRFFLGLI ISVIAVMIIL
DIWDLSLAPL LAGVGIGGLV IGLALQEPLA NFFSGLFLLV SRAVKEGEAL EAGGVSGTVE
VVNLNHTVIR TWDGRRVMIP NKAVWNDKII HFWPSNVRRQ EIVVGVPYSA DLRKVVEIFQ
KALEDEETVE KDPAPAIVFS AFNSSSIDFI IRFWVNRDNF FEGMKRLAFR IKDYLEKEGI
YIPFPQLDVH FDEEFIRAWK HEGSENKS
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