| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1126 |
|---|
| Symbol | |
|---|
| ID | 5170430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1151649 |
|---|
| End bp | 1152200 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640563645 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001244716 |
|---|
| Protein GI | 148270256 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000015615 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTCAGAA CGATCGCTGA TCACCTCGTG GATGTCGCCC AAAATTCCGT GAAGGCAGGA
GCGAAAAACA TAAAAATAGA AATTGAAGAG ACCGATGAGT GGTTCTGTTT CATTGTGGAA
GACGACGGAC CTGGTATAGA GGATCCAGAA AGGGTGTTCG ATCCCTTTTT CACCACAAGG
GATCCCAGGC TGAGAAAAGT GGGACTCGGT CTTCCGTTTT TGAAACAGGC CACGGAACAG
ACAGGTGGAT TCGTTAAATT GCACACAGAA AGAGGAAAGG GAACAAGGGT GGAAGCGCGA
TTCAACCTGA AGAGTGTGGA TTGCCAGCCG GTTGGGGACG TAGCCGGTGC ACTCGCGAGT
CTCGTTCTTT CAGGCCCCGG TGTGAACTGG TACATCATCA GAAAGAAGAA TGGAAACGGT
TACGAGATAG ATACCATCAA ATTGAAGGAG AAAGGGCTCT GGGACCCAGA GAATCCTGGT
TTTGCGGCTT TTCTTTTCGA AACTCTGGAA GACCTCGAGA AAGAGCTGAA AGGAGGTGAA
AACAATGAGT GA
|
|---|
| Protein sequence | MLRTIADHLV DVAQNSVKAG AKNIKIEIEE TDEWFCFIVE DDGPGIEDPE RVFDPFFTTR
DPRLRKVGLG LPFLKQATEQ TGGFVKLHTE RGKGTRVEAR FNLKSVDCQP VGDVAGALAS
LVLSGPGVNW YIIRKKNGNG YEIDTIKLKE KGLWDPENPG FAAFLFETLE DLEKELKGGE
NNE
|
|---|
| |