Gene Tpet_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1119 
Symbol 
ID5170037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1145247 
End bp1145960 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content47% 
IMG OID640563636 
Producthypothetical protein 
Protein accessionYP_001244709 
Protein GI148270249 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0242849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCTTC AAAAAATCAT CGGAGCATTT CTGGTAACAC CCGGTCTTTT CATACTCCTG 
TTGATCGTGG GGAGTTTCTT TTTCAAAAAA GCAAGATGGT TCCTCTTGGC TTTGGCAGTG
ACCGCGTATC TTTTCAGCAG TTACGTGGGG GAGTTTCTCT TTCTCTGGTC TCTCGAGAAA
AACCTCGATG TTCCTGCAAC GCTTCCAAAC GATGCTGTGA TCGTTGTTCT CGGTGGTGGT
GTGGAAAGAA ACACGAAAGC GGGTGACAAC CTCAGCGATG CCACTCTGAG AAGGCTTCTG
ACAGGTGTAC AGATCTACCA GAAGACAAAA ATGCCTATAC TCGTAACCGG TGGTAGCCTA
ACCGGGCTGA GGCCGGAAGC GATGATAATG AAAGACTACC TTGTTTCGCT GGGTGTTCCC
GAGGAGAAGA TCACCGTTGA AGACAGATCG AGAAACACGT ACGAAAACGC CTTTTTCACG
AGGGAAAAAA TAGGAGATGT GCCCATCATT CTGGTAACCG ATTCGATTCA CATGAGAAGG
GCTGTTTCCA CTTTCAAAAG TTTTTTCCAG AGTGTAACAC CGTACCCCGC TGGATTCTAC
TTTGGAGATC CGGAGTTCGT AGATTTCCTT CCGAATGCCA CCTCTTTCTA TCTGAATTCA
CGGGCCATCT ACGAGTGGAT CGGTCTTGTC TGGTACAATT TCAGGTGGAG GTGA
 
Protein sequence
MFLQKIIGAF LVTPGLFILL LIVGSFFFKK ARWFLLALAV TAYLFSSYVG EFLFLWSLEK 
NLDVPATLPN DAVIVVLGGG VERNTKAGDN LSDATLRRLL TGVQIYQKTK MPILVTGGSL
TGLRPEAMIM KDYLVSLGVP EEKITVEDRS RNTYENAFFT REKIGDVPII LVTDSIHMRR
AVSTFKSFFQ SVTPYPAGFY FGDPEFVDFL PNATSFYLNS RAIYEWIGLV WYNFRWR