| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1068 |
|---|
| Symbol | |
|---|
| ID | 5171632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1096150 |
|---|
| End bp | 1097346 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640563587 |
|---|
| Product | argininosuccinate lyase |
|---|
| Protein accession | YP_001244661 |
|---|
| Protein GI | 148270201 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0165] Argininosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000423672 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAA AACTCTGGGA AAAGGGCTAC AAAGTCAACG AAGAAGTAGA AAAATTCACC
GTCGGAGACG ATTACGTAAC GGACATGAAG ATCATAGAAT ACGACATAAA GGCCTCCATA
GTACACTCCA GGATGCTACA CAAAATAGGC CTTCTGAGTG CGGAAGAACA AAAGAAAATA
GAAGAAGCGC TCAGTGAACT CCTCAATCTT GTAAAAGAAG GAAAGTTCCA GATAAAACCG
GAGGAGGAAG ACTGCCACAC TGCCATCGAG AACTTCCTCG TGAAAAAGCT TGGAGAGATC
GGAAAAAAGA TACACACCGC TCGCTCAAGG AACGATCAGG TCTTAACCGC ACTGAGACTC
ATGTACAAGG AAGAATTGAA AGAGATAGAA AACCTCATCA GAGAGCTCCA AAAGAGCCTG
GAAAGATTCA TAGAAAAGTT CGGTGACGTG AAATTTCCAG GATACACCCA CACCAGAAAG
GCGATGCCAA CTGATTTTGC AACGTGGGCT GGGGCGCTGA AAGACGCCCT CGAAGACGAT
CTGAAACTTC TAAAAACAAC TTACGAAATC GTAGATCAAT CTCCTCTGGG GACGGGAGCT
GGCTACGGTG TTCCCATCGA CATAGACAGA GAGTTCACAG CGAAAGAACT CGGATTCTCG
AGGGTCCAGT GGAATCCCAT CTACACCCAG AACAGCAGGG GAAAGTTCGA ATATCTTATT
CTTCACACGC TCTCTCAGAT ATCCTACGAC TTGAACAGGT TCGCCTCCGA TATCATATTC
TTTTCTCTTC CAGAGATAGG TTATCTCAAA CTGCCAAAAG AGCTCTGCAC GGGAAGTTCC
ATCATGCCGC ACAAGATAAA TCCGGATCCA CTGGAACTCG TAAGGGCCTA CCACCACGCG
ATAGTTTCGA AGATGCTGAT GGCAGTCACT CTGCCGTCGA ATCTCATCTT CGGCTACCAC
AGAGATTTCC AGCTTCTGAA GAAGCCGGTG ATAGAGGCTT TCGAAGTTGT TAAGAATATC
GTAAGAATAA TGAAAATAAT TTTTGACCAT CTTGAAGTTG ATAAAGAAAG ATCTGAGTCT
AGTATTACTG AGGAAGTACT GGCCACACAC AGGGTCTATG AACTGGTGAA ACAGGGGGTA
CCGTTCCGCG ACGCTTACAG GATGGTAGCG GAAAAGTACG GGAGGGAAAA AGATTGA
|
|---|
| Protein sequence | MSEKLWEKGY KVNEEVEKFT VGDDYVTDMK IIEYDIKASI VHSRMLHKIG LLSAEEQKKI
EEALSELLNL VKEGKFQIKP EEEDCHTAIE NFLVKKLGEI GKKIHTARSR NDQVLTALRL
MYKEELKEIE NLIRELQKSL ERFIEKFGDV KFPGYTHTRK AMPTDFATWA GALKDALEDD
LKLLKTTYEI VDQSPLGTGA GYGVPIDIDR EFTAKELGFS RVQWNPIYTQ NSRGKFEYLI
LHTLSQISYD LNRFASDIIF FSLPEIGYLK LPKELCTGSS IMPHKINPDP LELVRAYHHA
IVSKMLMAVT LPSNLIFGYH RDFQLLKKPV IEAFEVVKNI VRIMKIIFDH LEVDKERSES
SITEEVLATH RVYELVKQGV PFRDAYRMVA EKYGREKD
|
|---|
| |