| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0947 |
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| Symbol | |
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| ID | 5171574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 970041 |
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| End bp | 970931 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640563465 |
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| Product | glycosidase, PH1107-related |
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| Protein accession | YP_001244541 |
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| Protein GI | 148270081 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2152] Predicted glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTGA AGCTGGAAAG ACACCCGGCA AATCCCATTC TGGAACCTTC TCCGTACTTT
CTCTGGGAGA GCAGGTTTGT TTTCAACCCG GCTGTGGTGT ACGACGGAGA ACTCTTTCAC
ATGCTCTACA GAGCGCAAGG AGAGGACATG GTTTCAAGAA TCGGATACGC CGTGAGCACC
GACGGAATTC ATTTCAACAA GTTCGAAAAG CCCGTATTCG CGCCCAAGAG TGATGATGAA
CTCTATGGAG TGGAAGATCC CAGGATCACG AAGATAGGAG ACGAGTACTA CATGGTTTAC
ACTGCCTATT CTCCACGTGG TGTCAGAATC GCTATGGCCT CCACGAAGAA TTTCATCACC
TGGAAGAGGT ATGGTGTTGT GATACCAGAA ATGGATAACA AAGACGCGGC TCTATTTCCT
GAGAAAATCA ATGGAAAGTA CGTTATGTTC CACAGAATTC CGCCTGATAT GTGGCTTGCG
TTTTCCGATG ATCTCGTGCA CTGGGACAAC TTTGTGAAGA TCGCTTCTCC AAGGCCTGGG
ATGTGGGACG ACTTGAAGAT CGGAGTGGGA GCTCCTCCGA TAAAGACTGA GTACGGCTGG
CTCGTTCTCT ATCACGGCGT GCAGAACACG GGTACTTCCA GACCCACATA TCGACTCGGG
TTCATGCTGC TCGATCTGGA GGATCCCACA AAAGTCATAA AAAGGTCGAA AGAACCCATT
CTGGAACCGG AAGAGGACTG GGAGAAATTC GGGGGAGTAC CGAACGTGGT CTTCAGCGAT
GCGATGATAG AGTATAACGG TTACTACTAC GTCTACTACG GAGCAGCAGA CAACTGTATT
GCTCTTGCGA CAATTCCTGT GGAAAAGGTT ATGAAATGGT GTAGAGAATA G
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| Protein sequence | MELKLERHPA NPILEPSPYF LWESRFVFNP AVVYDGELFH MLYRAQGEDM VSRIGYAVST
DGIHFNKFEK PVFAPKSDDE LYGVEDPRIT KIGDEYYMVY TAYSPRGVRI AMASTKNFIT
WKRYGVVIPE MDNKDAALFP EKINGKYVMF HRIPPDMWLA FSDDLVHWDN FVKIASPRPG
MWDDLKIGVG APPIKTEYGW LVLYHGVQNT GTSRPTYRLG FMLLDLEDPT KVIKRSKEPI
LEPEEDWEKF GGVPNVVFSD AMIEYNGYYY VYYGAADNCI ALATIPVEKV MKWCRE
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