| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0941 |
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| Symbol | |
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| ID | 5169988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 962486 |
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| End bp | 963472 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640563459 |
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| Product | alanine racemase |
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| Protein accession | YP_001244535 |
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| Protein GI | 148270075 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00393533 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCAACAA TAGAAGATGT CGCAAAGCTT GCCGGGGTTT CCATCGCAAC TGTTTCAAGA
GTGATAAACG GTTCGGGTTA TGTTTCGGAA AAAACAAGAT ATAAAGTCTG GAAAGCCATT
GAAGAGCTGG GTTATAAGCC AGAGATTTCA GCGAAGCTCC TTGCTTCGAA GGGAAAACTG
TTCAATATCC ATGTGTTTGC CAGTAAAAGA ATACTGTCGC CTCTTCAAAG CAATGGCATT
TTGGGAGAGT TCTACGGAGT GATAATAAGA GCCATTGAGG AAAATTGTGG AAGACTTGGA
ATGAATGTAG AACTGAAAAT GCTCGAGAAC TTTTTTGAGT CAAATGGAGC CGATGGTTAC
ATATTCATAG GGGGAGATCT CTCGGAGAAG ACTTTGAAGG AAATCAAATC GAGGAAGAAA
CCTTTTGTTC TGGTGGACCA TTACATTCCC GGAGAGCGTG TGGATTGTGT GATAAGTGAC
GGATACGATG GAGCGCTTTA TGCGACAAAT TACCTCATTT CTAAAGGTTT CAGACGAATC
GTTCACATTC ACGGTCCGCT GCATCCATAC GGTTTCAAGA TGAGATACGA CGGTTATAAA
GACGCAATGG AAAAAGCAGG ATTAATGCCT CGATTTTATG AGTGCGATGA CACAGAAGAA
GGAACCAGAA AAGTTATCGA CATCATGTTG AACTCTTATG GCACACCGGA AGCTATTTTC
ACTTCCAACG ATAGCATCGC GTTCTGGACG ATAAAACGCC TCAAAGAGCA TGGTATCAGA
GTGCCAGAAG ATGTTTCTGT AATAGGTTTT GACGATATTG TTGATGCTGA AAACTTCGAT
CCTCCTTTGA CGACACTGAG GGTCTTCAAG TACGAAATGG GCTGTCTTGC GTGTAAGCGC
TTACATGAAT TGCTAACTGG CATTAATCCA CACCCTGTTC GCATTCTTGT TTTCACACAG
TTTGTAAAGA GAAAAAGCAC AAAATAA
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| Protein sequence | MPTIEDVAKL AGVSIATVSR VINGSGYVSE KTRYKVWKAI EELGYKPEIS AKLLASKGKL
FNIHVFASKR ILSPLQSNGI LGEFYGVIIR AIEENCGRLG MNVELKMLEN FFESNGADGY
IFIGGDLSEK TLKEIKSRKK PFVLVDHYIP GERVDCVISD GYDGALYATN YLISKGFRRI
VHIHGPLHPY GFKMRYDGYK DAMEKAGLMP RFYECDDTEE GTRKVIDIML NSYGTPEAIF
TSNDSIAFWT IKRLKEHGIR VPEDVSVIGF DDIVDAENFD PPLTTLRVFK YEMGCLACKR
LHELLTGINP HPVRILVFTQ FVKRKSTK
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