| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0801 |
|---|
| Symbol | |
|---|
| ID | 5171112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 811893 |
|---|
| End bp | 812696 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640563320 |
|---|
| Product | periplasmic solute binding protein |
|---|
| Protein accession | YP_001244396 |
|---|
| Protein GI | 148269936 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAGGA TTCTTCTCCT TCTAGTACTC GCTGTCACCG TTTTGAGTTT CGGCAAAACT
ATCGTGACCA CGATAAACCC GTACTACCTC ATCGTTTTTC AACTGCTCGG CGATACGGCG
AGCGTAAAGC TCCTTGTTCC CCCTGGAGCG AATCCACACT TGTTTTCACT AAAGCCTTCC
GACACTAAGA CTCTGGAAGA AGCGGATCTG ATCGTAGCGA ACGGACTCGG ATTGGAAACG
TATTTGGAAA AATACAAAGA AAAGACAGTT TTCGTTTCAG ACTTCATTCC AGCACTTCTT
CTCGTCGACG AGAACCCTCA CATCTGGCTC GATCCTTTCT TCCTCAAATA CTACATTGTT
CCTGGACTGT ACCAGGTTCT CATCGAGAAA TTCCCGGAAA AACAGAGTGA AATAAGACAG
AAAGCAGAAG AGATCGTAAG CGGACTGGAC ACCGTGATCA GAGAATCTTT CGAAACTCTC
CTTCCCTACA CCGGAAAAAC AGTGGTGATG GCTCATCCGA GTTTTACGTA CTTCTTCAAG
GAATTCGGCC TGGAATTGAT ACCACTCTCC AGCGGTCATG AACACAGCAC GAGTTTTTCC
ACGATCAAAG AGATCCTCAG GAAAAAAGAA CAGATTGCTG CCCTGTTCAG AGAACCACAG
CAGCCGGCAG AGATTCTTTC GAGCCTCGAA AAAGAACTGA GAATGAAGAG CTTCGTGCTC
GATCCCCTCG GAGTGAACGG AGAAAAGACG ATCGTGGAAC TCCTGAGAAA GAATCTTTCT
GTGATCCAGG AGGCGCTGAA ATGA
|
|---|
| Protein sequence | MRRILLLLVL AVTVLSFGKT IVTTINPYYL IVFQLLGDTA SVKLLVPPGA NPHLFSLKPS
DTKTLEEADL IVANGLGLET YLEKYKEKTV FVSDFIPALL LVDENPHIWL DPFFLKYYIV
PGLYQVLIEK FPEKQSEIRQ KAEEIVSGLD TVIRESFETL LPYTGKTVVM AHPSFTYFFK
EFGLELIPLS SGHEHSTSFS TIKEILRKKE QIAALFREPQ QPAEILSSLE KELRMKSFVL
DPLGVNGEKT IVELLRKNLS VIQEALK
|
|---|
| |