| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0665 |
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| Symbol | |
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| ID | 5170731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 673868 |
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| End bp | 674779 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640563172 |
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| Product | D-alanyl-alanine synthetase A |
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| Protein accession | YP_001244261 |
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| Protein GI | 148269801 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000619225 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAGTGG CTCTCCTGAT GGGAGGAGTA TCAAGGGAAA GAGAAATCTC CCTGAGAAGC
GGAGAAAGGG TAAAAAAAGC TCTTGAAAAA CTTGGGTATG AATACACCGT TTTTGATGTT
AAAGAGGATT TTCTCAAAGA AGTGGATCAG TTAAAAAGTT TTGATGTGGT CTTCAATGTT
CTCCATGGAA CTTTTGGTGA GGATGGAACG CTTCAAGCAA TTCTGGATTT TTTGGGAATT
AGATACACCG GGTCCGATGC GTTTTCAAGT ATGATTTGCT TTGATAAACT AGCAACTTAC
AGGTTTTTAA AAGACATCGT CGAGATACCT GATTTCATAG AGATCAGGGA ATTCATGGAA
ACTTCTCCCC TCGGGTATCC CTGTGTGGTA AAACCGAGGA GGGAGGGTTC AAGTATAGGA
GTGTTCATTT GTGAATCGGA TGAAGAGTTT CAACACGCGC TCAAAGAAGA TTTACCACGA
TATGGGAGTG TGATTGTTCA AAAGTACATC CCTGGCAGGG AGATGACCGT GTCTATTTTA
GAGACAGAAA AAGGTTTCGA GGTCCTTCCC ATTCTTGAGT TGCGACCGAA GCGTCGGTTC
TACGACTACG TTGCGAAGTA CACGAAAGGT GAAACTGAGT TTATTCTTCC TGCTCCTTTG
AATCCTTCGG AAGAACGACT CGTCAAGGAA ACAGCCCTCA AAGCATTTGT GGAAGCTGGT
TGCAGAGGTT TTGGAAGAGT GGATGGTATT TTCAGCAATG GTAGGTTCTA CTTTCTGGAA
ATCAACACAG TGCCAGGTTT AACAGAAACC AGTGATCTTC CAGCAAGTGC GAAAGCGGGG
GGGATCGAGT TCGAGGAACT CGTTGAAATC ATCTTAAAAA GCGCCTTTTT GAAGGGAGAG
GTGAGAGCAT GA
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| Protein sequence | MRVALLMGGV SREREISLRS GERVKKALEK LGYEYTVFDV KEDFLKEVDQ LKSFDVVFNV
LHGTFGEDGT LQAILDFLGI RYTGSDAFSS MICFDKLATY RFLKDIVEIP DFIEIREFME
TSPLGYPCVV KPRREGSSIG VFICESDEEF QHALKEDLPR YGSVIVQKYI PGREMTVSIL
ETEKGFEVLP ILELRPKRRF YDYVAKYTKG ETEFILPAPL NPSEERLVKE TALKAFVEAG
CRGFGRVDGI FSNGRFYFLE INTVPGLTET SDLPASAKAG GIEFEELVEI ILKSAFLKGE
VRA
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