Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0601 |
Symbol | |
ID | 5170717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 597916 |
End bp | 598242 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640563109 |
Product | alkylhydroperoxidase |
Protein accession | YP_001244198 |
Protein GI | 148269738 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000123589 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGAAT TCGAAAGGTG GAGAAGAGAA TTCCCTGAGG TGAGCGGTGC GGTTGTGAGG ATGAGAAATA AGGCCTTTTC TGATGGATCG ATACCTGCAA AGTACAAGGT GCTGGCAGCC TTAGCCATAG CGGTTGTGGA AAAGTGCAAG CCCTGTGCTC AGGGGTACTA TCAAAAAGCA ATTGAAATGG GTGCCACAAA GGATGAAATA AAAGAGATCC TCGAAGTTGC TGTCACCATG GGAGCCTGCA TCGCAGAAAC CTGGGCGAGG GAGGTGTGGC AGTATGAGCG ATCAGAAAAC GATGGAGGAT CGTGCTGCGA AGAATGA
|
Protein sequence | MNEFERWRRE FPEVSGAVVR MRNKAFSDGS IPAKYKVLAA LAIAVVEKCK PCAQGYYQKA IEMGATKDEI KEILEVAVTM GACIAETWAR EVWQYERSEN DGGSCCEE
|
| |