| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0576 |
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| Symbol | |
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| ID | 5170254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 574956 |
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| End bp | 575717 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640563083 |
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| Product | prephenate dehydrogenase |
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| Protein accession | YP_001244173 |
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| Protein GI | 148269713 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00152184 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAAATTT CTGTGCTCGG AGCGGGATGC ATCGGTGGAT CGATCGCACT TAAATTGAAA
GAAAAGCATC ATGTCACAGC CTTCGACAGA GATGAAGAAA CGATGAAAGC ATTGGAAGAA
AACGGAATAG AAACTGTTTC AAAGGAAAGC GATCTCTACG ATACAGACCT TCTCGTTCTT
GCGCTTCCCA TGAGCGTCGA GGAGAGATTC CTGAAAGAAA CGGACTTTTC AGGGAAGATT
CTCGATGTGG CGAGCGTGAA GACACCTTTC ATGGAAATAG CCAGAGAGAG GGGATTGAAC
TTCACAGGAG GACATCCCAT GGCCGGAAAC GAACGAAAGG GAAAATCAGG TTGGGATCGA
GAAATGTTCG ACGGAAAGAT CTTCTTTCTC TGCTCTCTCG ACGGAAAAGA GGATGGGATG
ATTGAAAACA TCGTGAAAGA TCTTGGTGCC AGACCTTTGT GGATAGACTA CAGGATCCAC
GACGAGATCG TCGCTGCGGT GAGCCACGTT CAGTACTTGA TCTCACTGAG CGCACGGTAC
GTAGGGAAAC CCTTTGAAGA ATACGCGGGA CCTGGTTATC TTTCCAACAC GAGACTTTCG
AAACAGAACA TGGAGATGGC GCTGGATATG ATCAGATATA ATAAAGAAAA CATCCTCAAA
TACCTGGAGA ACGCAAGAAA CTTTCTGAAT GTTTTATATC ATCTCACAGA GAAAGAGGAT
TTCGAAAACC TGAAAAAAGT GATAAGGGAA GTGATATCTT GA
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| Protein sequence | MKISVLGAGC IGGSIALKLK EKHHVTAFDR DEETMKALEE NGIETVSKES DLYDTDLLVL
ALPMSVEERF LKETDFSGKI LDVASVKTPF MEIARERGLN FTGGHPMAGN ERKGKSGWDR
EMFDGKIFFL CSLDGKEDGM IENIVKDLGA RPLWIDYRIH DEIVAAVSHV QYLISLSARY
VGKPFEEYAG PGYLSNTRLS KQNMEMALDM IRYNKENILK YLENARNFLN VLYHLTEKED
FENLKKVIRE VIS
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