Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0571 |
Symbol | |
ID | 5171021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 569952 |
End bp | 570386 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640563078 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_001244168 |
Protein GI | 148269708 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0757] 3-dehydroquinate dehydratase II |
TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000293441 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAGTAC TCGTGGTGAA CGGACCCAAC TTGAACATGC TCGGAAAAAG AGACAAAAAC ATCTATGGAA ACTTTTCTCA TGAGGATCTT GTGAAGATGA TAGAAGATTG GGGAAGGAAA AACGATGTGG AAGTGGAGGT CTTTCAGTCG AACCACGAGG GAGAAATTTT GGATAGACTG CACAGGCTCG ATTTCGATGG TCTTGTGATA AACCCGGGGG CTTTCACCCA CTACAGCTAC GCCATAAGGG ATGCCCTGGA GATCGTGAAG GTGCCGAAGG TGGAGGTTCA CATATCGAAC ATACACAGGA GGGAAGAGTT CAGAAGAAGG AGCGTTACGG CTGAGGTGTG CGACGGTCAG ATAAGCGGAC TTGGTGTGTA CGGTTACCTT CTGGCTCTGG AGTACATAAA AAAGAAACTG GAAGAACTCA CCTGA
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Protein sequence | MKVLVVNGPN LNMLGKRDKN IYGNFSHEDL VKMIEDWGRK NDVEVEVFQS NHEGEILDRL HRLDFDGLVI NPGAFTHYSY AIRDALEIVK VPKVEVHISN IHRREEFRRR SVTAEVCDGQ ISGLGVYGYL LALEYIKKKL EELT
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