Gene Tpet_0541 details

Gene Information

• Locus tag: Tpet_0541
• ID: 5170611
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 537842
• End bp: 538567
• Gene Length: 726 bp
• Protein Length: 241 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640563048
• Product: hypothetical protein
• Protein accession: YP_001244138
• Protein GI: 148269678
• COG category: [R] General function prediction only
• COG ID: [COG0730] Predicted permeases

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0617449
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGTTC TTGTGTTCCT TGGGGGTATC CTCGCGGGCT TTTTAAATGT TCTTGCAGGT 
GGTGGCTCAA TGATCACACT TCCCATTCTA ACAGCGCTGG GACTCGGAAT AGATGTTGCA 
AACGGAACAA ACAGGATCGC CATAATACTT CAAAATCTTG TGGCAATTGA AAGGTTCAAA 
GCCAAGAAAG TTCTAAAAAT AAAAGAAGCG ATTCTTGTTG CTTTGCCGGC CATAGTGGGA 
GCGATCTTAG GGAGTTCCAT AGCGGTTCAG ATAGAAAAAG AATTGCTTCA GAAAATCGTT 
GGTGTTATCT TCCTCGTCAT GGCCGTTTCT CTTGTCTGGA AACCAAGAAT TTGGCTTGAG 
GATAGATCCG TCAAGAGAAA CTGGGTTCTC ATATACATCG CCTTCTTTCT GATCGGTATT 
TACGGTGGGT TCATTCAAGC GGGAGTGGGC TTTCTTCTCA TGCCGGCAAT CACTCTTCTT 
CTTGGATACG AACTGGTCAA AACAAACGCG ATAAAAGTTT TTATCGTAGC CTCGTACAAC 
ATAATCTCGC TGATAATTTT CATTCTGAAC GGAAAGGTTA ATTTCCTCTA CGGCTTGATT 
CTCGCGCTTG GAAATATGAC AGGAGCGTGG CTTGCAGCTA CTTTCTCCGT TAAGAAGGGG 
GCAAATTGGG TGAGATGGAT CGTCTTTGCG GCAATAATCG TGGTTGGAAT AAGATACGTT 
TTTTAA 

 

Protein sequence

MIVLVFLGGI LAGFLNVLAG GGSMITLPIL TALGLGIDVA NGTNRIAIIL QNLVAIERFK 
AKKVLKIKEA ILVALPAIVG AILGSSIAVQ IEKELLQKIV GVIFLVMAVS LVWKPRIWLE 
DRSVKRNWVL IYIAFFLIGI YGGFIQAGVG FLLMPAITLL LGYELVKTNA IKVFIVASYN 
IISLIIFILN GKVNFLYGLI LALGNMTGAW LAATFSVKKG ANWVRWIVFA AIIVVGIRYV 
F