| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0306 |
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| Symbol | |
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| ID | 5171143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 287629 |
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| End bp | 289032 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640562809 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001243911 |
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| Protein GI | 148269451 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGT ATATAAAGGG ATTCCTTTCG TTTTCTGCTG GCACATGGAT CCGTGCTATT
GTTAGCTTTT TTTCTACTCC CGTCATAAGT TATCTGATTG TTCCTGAAGA GTTCGGAAAA
GCAGCCATGT TCACACTCGT TTATAACATC GCTCTTCTTG TTTCTCTAAC AGGGCTCGAT
CAGAGTTTTG TGAGATATTA TTACCAAGAA GAGAAAAGGA ATGAGTTGTT CTGGAGTTGT
GTATTTTTAC CTTTTACTTT TGGTATTTCT GTATCCCTTA TTTTCATTCT TTTCGAGTCT
CATCTTAGTC TGATTCTTTT CGGAAAAGAC TATCAAGGAA TAGGACTTAT TTTCTCCATC
TCTCTTATGA CGGGCATCTT CCAGAGGTTC AACCAACTCT CTATCAGAAT GCAAAAGAGA
GGAGTTCTCT ATTCTATACT TGATGTAGTG AATTCTCTTG GAAACGTGGG AGGAACCATA
GTTTTTGCTC TGACCGTTTC AAAAAGTTTT TATGCTGTTG TCTGGGGACA GATCTGTGGA
AACGTATCAG CTCTGGTTTT GGGTTTTATC ACCGACAGAG AGTCACGGAA GTTCGCGAAG
GTAAATTTCA AAAAAATAGG AGAGTTCCTA AAGTACGGTT TGCCGCTTCT TCCAAGTTCT
CTTCTCTTTT GGCTTTTTTC TTCGATAGAC AGAATTTCCC TGAGACAGTA CTCAAATTTT
ACAGAGATAG GACTCTACAG TGCGGCTTTC AAGATAGTCT CTGTGATGCA ACTGTTTCAG
GCAGGTTTCA CCACATTCTG GATTCCGCTC GCTTATGAAA GATTCGAGAC CCGGCCCGAC
TCCAGAGAAT TCTTCAAAAA GGCAAATCAA ATGGTAAGCC TCACCATATT TTTGTTTGGT
CTTCTTGTTC TTTCCTTCAA GGATATGATC TTCTTGCTCT TTGCCAGAAG TTACAGAAAT
GCATCTTTCA TTGCTCCTTT TCTGATTTTA CAACCGATCA TGTATGTTGT ATCAGAGACA
ACGGTTCTTG GGATAAACTT CACGAAAAAG ACGTACTGGC ACATCGTCGT GACCGGACTT
TCTGCTCTGG CCAATTTTGC AGGGAACCAG CTTCTTGTTC CATACCTTGG AGCAAAAGGT
GCCGCCATAT CCACAGGTCT TTCATATGTT CTTTTCTTCA CCCTCAGAAC ACTCATAGCC
GAGAAACTTT ATCCGATCGG TTTTAACCTT AAGAAGATCT ACGCTGGTGT CCTTGTTGTC
TCACTGGTAG CATTTTTTGG AACTTTCCTG GAAAATTTCC TGATCTTTCC TCTTCTATCC
GTCACAGGGA TATTTCTTAT CTTACTTCTC TACAGAGACG AGATGATCTA TCTGAAAAAC
CATTTCAAAA ACCTGCACAG GTAA
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| Protein sequence | MKQYIKGFLS FSAGTWIRAI VSFFSTPVIS YLIVPEEFGK AAMFTLVYNI ALLVSLTGLD
QSFVRYYYQE EKRNELFWSC VFLPFTFGIS VSLIFILFES HLSLILFGKD YQGIGLIFSI
SLMTGIFQRF NQLSIRMQKR GVLYSILDVV NSLGNVGGTI VFALTVSKSF YAVVWGQICG
NVSALVLGFI TDRESRKFAK VNFKKIGEFL KYGLPLLPSS LLFWLFSSID RISLRQYSNF
TEIGLYSAAF KIVSVMQLFQ AGFTTFWIPL AYERFETRPD SREFFKKANQ MVSLTIFLFG
LLVLSFKDMI FLLFARSYRN ASFIAPFLIL QPIMYVVSET TVLGINFTKK TYWHIVVTGL
SALANFAGNQ LLVPYLGAKG AAISTGLSYV LFFTLRTLIA EKLYPIGFNL KKIYAGVLVV
SLVAFFGTFL ENFLIFPLLS VTGIFLILLL YRDEMIYLKN HFKNLHR
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