| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0244 |
|---|
| Symbol | |
|---|
| ID | 5171775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 235009 |
|---|
| End bp | 235365 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640562747 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001243849 |
|---|
| Protein GI | 148269389 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0718] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00103] DNA-binding protein, YbaB/EbfC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAGA TCAAAAGCTT CGGAGGAAAG AACCTGGGTG GGGGAAAGCA GGAAAAGCTT
TTGAAGGACT TCGCCAAAAT GCAGGAGGAG CTCCAGAAAA AAATCCAGGA ACTCGAAGAG
AGCTTTTCGC AGATAGAGGT CGAGGCTTCC GTTGGTGGAG GAGCCGTCAG AATCGTTGCA
ACCTGTGATA GGAGAGTCAA GGATATAGAA ATAGACGAGG ATCTGAAAGA AGACTTCGAT
ACGTTGAAGG ATCTTCTGAT AGCGGGAATG AACGAAGTCA TGGAAAAGAT CGAGAAACGC
CGTGAAGAGG AGATGAGCAA AATAACTCAG CAATTTGGAA TACCAGGATT GATGTGA
|
|---|
| Protein sequence | MKKIKSFGGK NLGGGKQEKL LKDFAKMQEE LQKKIQELEE SFSQIEVEAS VGGGAVRIVA
TCDRRVKDIE IDEDLKEDFD TLKDLLIAGM NEVMEKIEKR REEEMSKITQ QFGIPGLM
|
|---|
| |